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ACD23_453_4

Organism: ACD23

partial RP 23 / 55 MC: 9 BSCG 17 / 51 MC: 2 ASCG 0 / 38
Location: comp(1481..1738)

Top 3 Functional Annotations

Value Algorithm Source
Protein hfq n=5 Tax=Comamonadaceae RepID=HFQ_ACIET (db=UNIREF evalue=9.0e-37 bit_score=155.0 identity=91.46 coverage=94.1860465116279) similarity UNIREF
DB: UNIREF
  • Identity: 91.46
  • Coverage: 94.19
  • Bit_score: 155
  • Evalue 9.00e-37
RNA chaperone hfq similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 83.0
  • Bit_score: 149
  • Evalue 4.10e-34
Hfq: RNA chaperone Hfq (db=HMMTigr db_id=TIGR02383 from=6 to=65 evalue=5.7e-35 interpro_id=IPR005001 interpro_description=Host factor Hfq GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.70e-35

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 258
GTGAGCAATAAAGGCCAACTTCTGCAAGATCCTTTCCTGAACGCCTTGCGCAAGGAGCATGTGCCGGTCTCCATTTATTTGGTGAACGGTATCAAGCTGCAGGGACAAATCGAATCATTTGACCAGTATGTGGTGTTGCTGCGCAACACAGTGACCCAGATGGTTTACAAGCACGCCATATCCACAATTGTGCCGGGACGTGCAGTGAATTTCTTGACGCCAGACGCCGCCCCGGATGCCGACAACAGCGGCGTCTGA
PROTEIN sequence
Length: 86
VSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAISTIVPGRAVNFLTPDAAPDADNSGV*