ggKbase home page

13_1_20cm_2_scaffold_3924

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3924_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(63..2027)
-----------------
DNA (1965bp)
protein (655aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W2_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:ACZ39279.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
hypothetical protein
13_1_20cm_2_scaffold_3924_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2024..3055)
-----------------
DNA (1032bp)
protein (344aa)
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z2E9_9CLOT
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_3924_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3057..3644)
-----------------
DNA (588bp)
protein (196aa)
Putative aliphatic sulfonates transport permease protein SsuC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXH0_9RHIZ
ssuC; ABC transporter, membrane spanning protein (nitrate/sulfonates); K15554 sulfonate transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
putative sulfonate ABC transporter permease protein SsuC/YcbM-like protein
13_1_20cm_2_scaffold_3924_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4498..5298)
-----------------
DNA (801bp)
protein (267aa)
ABC transporter permease n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XHQ5_9NOCA
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter permease
13_1_20cm_2_scaffold_3924_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5341..5553)
-----------------
DNA (213bp)
protein (71aa)
cupin n=1 Tax=Variovorax paradoxus RepID=UPI000375E504
Cupin region {ECO:0000313|EMBL:ACS20164.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
cupin domain-containing protein
13_1_20cm_2_scaffold_3924_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

5652..8000
-----------------
DNA (2349bp)
protein (783aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EFF67
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_20cm_2_scaffold_3924_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8005..9015
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000366F759
aliphatic sulfonates ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
aliphatic sulfonates ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_3924_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9020..9793
-----------------
DNA (774bp)
protein (258aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25); K02049 NitT/TauT family transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component (EC:3.6.3.25)
Uncharacterized protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PS75_STRVR rbh
13_1_20cm_2_scaffold_3924_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9793..10560
-----------------
DNA (768bp)
protein (256aa)
Putative Binding-protein-dependent transport systems inner membrane component n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8PL50_STRVR
putative taurine ABC transporter permease protein Tax=GWA2_Rokubacteria_73_35_curated
putative taurine ABC transporter permease protein
13_1_20cm_2_scaffold_3924_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10557..11318
-----------------
DNA (762bp)
protein (254aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036AC9E1
putative taurine ABC transporter permease protein Tax=GWA2_Rokubacteria_73_35_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_3924_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11315..11635
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035D1F33
Uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_3924_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11649..12419
-----------------
DNA (771bp)
protein (257aa)
Trans-aconitate methyltransferase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RL5_BRADU
Trans-aconitate methyltransferase {ECO:0000313|EMBL:BAC48013.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhi
tam; trans-aconitate methyltransferase
13_1_20cm_2_scaffold_3924_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12552..12866
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000379127F
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_20cm_2_scaffold_3924_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12916..14070)
-----------------
DNA (1155bp)
protein (385aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5M1_9BRAD rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
13_1_20cm_2_scaffold_3924_15
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

14274..14855
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
13_1_20cm_2_scaffold_3924_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

14872..15420
-----------------
DNA (549bp)
protein (183aa)
Osmotically inducible protein OsmY n=1 Tax=Enterobacter aerogenes EA1509E RepID=L8BIG2_ENTAE
osmY; OsmY; K04065 hyperosmotically inducible periplasmic protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Osmotically inducible protein OsmY
13_1_20cm_2_scaffold_3924_17
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(15564..17003)
-----------------
DNA (1440bp)
protein (480aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037A1612
putative multidrag resistance protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
EmrB/QacA subfamily drug resistance transporter
13_1_20cm_2_scaffold_3924_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17124..17312
-----------------
DNA (189bp)
protein (63aa)
Glutaredoxin n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NJ95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETW98310.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutaredoxin
13_1_20cm_2_scaffold_3924_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17356..18525
-----------------
DNA (1170bp)
protein (390aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI0003811DC3
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
major facilitator superfamily protein
13_1_20cm_2_scaffold_3924_20
unknown

Not on your lists

comp(18528..18746)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

13_1_20cm_2_scaffold_3924_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

18876..19724
-----------------
DNA (849bp)
protein (283aa)
Alpha/beta hydrolase fold protein n=1 Tax=Frankia sp. CN3 RepID=G6HBP3_9ACTO
alpha/beta hydrolase fold protein Tax=GWC2_Rokubacteria_70_16_curated
alpha/beta hydrolase fold protein
13_1_20cm_2_scaffold_3924_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19721..20824
-----------------
DNA (1104bp)
protein (368aa)
alcohol dehydrogenase class III; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA300-D14 RepID=UPI00036E0F49 rbh
alcohol dehydrogenase class III
Displaying 22 items

View Taxonomy