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13_1_20cm_2_scaffold_2711_1

Organism: 13_1_20CM_2_Rokubacteria_68_19

partial RP 22 / 55 MC: 1 BSCG 26 / 51 ASCG 11 / 38
Location: comp(1..573)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane transcriptional regulator (Anti-sigma factor) n=1 Tax=Pseudomonas sp. GM49 RepID=J2RLF2_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 194.0
  • Bit_score: 117
  • Evalue 1.80e-23
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 192.0
  • Bit_score: 123
  • Evalue 4.60e-25
membrane protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 197.0
  • Bit_score: 112
  • Evalue 1.20e-22

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Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGACCTGCGCCGACGCTCGCGATCTCGTCCTCGCGCACGCGCGAGGAGCGCTTCCACCCGGTGACGACGCCGCCGTGCGCGAGCACCTCGCCTCGTGTGCCGCGTGCGCGCGCGTGGACCACGTCGACCGCATGCTGAGCGAGGTCCTCGAGCAGCGGCTGCCCCAGCATCCCGCCTCGCTCGCGCTCAAGCGGCGGCTGGCGGCGGAATGGCCGGCGCCCCCGCGCGCGCGCACGTCCTTCAAACGCTTCGTGATGCCGGCCCTGGCTGCGGCCGCCGTCGTGCTCGCGCTGACGCCCCAGCTCTACCACCGACTCGTCGTCGTTCCCGGAGACCGGAACGCGCTCGTCACCGAGGCCGTGAATGACCACGTGCGCGTGCTGCTCAGCCAGCGGCCGATGGACGTCGAGAGCAGCGACGTCCACCAGGTCAAGCCGTGGTTCGCCGGTCGCCTCGATTTCGCGCCCGCGGTGGCGTTCGACGGCGACGCGGAGTTCCCGCTGCGGGGCGGCGCCGTCGGCTATTTCCTCGACCGGCGGGCCGCGGTGTTCCTCTACAGTCGCCGCCTGCAC
PROTEIN sequence
Length: 191
MTCADARDLVLAHARGALPPGDDAAVREHLASCAACARVDHVDRMLSEVLEQRLPQHPASLALKRRLAAEWPAPPRARTSFKRFVMPALAAAAVVLALTPQLYHRLVVVPGDRNALVTEAVNDHVRVLLSQRPMDVESSDVHQVKPWFAGRLDFAPAVAFDGDAEFPLRGGAVGYFLDRRAAVFLYSRRLH