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13_1_40cm_2_scaffold_1818

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1818_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..407)
DNA (405bp) protein (135aa)
Putative AP endonuclease, family 2 n=1 Tax=Variovorax paradoxus B4 RepID=T1XIS7_VARPD
putative AP endonuclease, family 2
Putative AP endonuclease, family 2 {ECO:0000313|EMBL:AGU52468.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
13_1_40cm_2_scaffold_1818_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(415..1188)
DNA (774bp) protein (258aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFH11341.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EFH11341.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaprot
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMX6_9PROT rbh
SDR-family protein
13_1_40cm_2_scaffold_1818_3
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1687..2742
DNA (1056bp) protein (352aa)
Selenocysteine lyase n=1 Tax=Sphingobium sp. AP49 RepID=J2WWK8_9SPHN
Selenocysteine lyase {ECO:0000313|EMBL:EJK86575.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source=
putative aminotransferase
13_1_40cm_2_scaffold_1818_4
unknown

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2837..3088
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_1818_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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4117..5874
DNA (1758bp) protein (586aa)
Membrane protein insertase YidC n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9G1_ACIC5
protein translocase subunit yidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
membrane protein
13_1_40cm_2_scaffold_1818_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5919..6455
DNA (537bp) protein (179aa)
Single-stranded nucleic acid binding R3H n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV79_KORVE
single-stranded nucleic acid binding R3H; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
single-stranded nucleic acid binding R3H
13_1_40cm_2_scaffold_1818_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6477..7691)
DNA (1215bp) protein (405aa)
membrane-bound metal-dependent hydrolase; K09151 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Protein of unknown function DUF457, transmembrane id=14426496 bin=bin1_lowGC species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_2_scaffold_1818_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7697..8809)
DNA (1113bp) protein (371aa)
selenophosphate synthase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037E85CD
selenophosphate synthase
13_1_40cm_2_scaffold_1818_9
unknown

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comp(8846..9088)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_1818_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

9432..10082
DNA (651bp) protein (217aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RSMG_KORVE
methyltransferase GidB
13_1_40cm_2_scaffold_1818_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10498..11304
DNA (807bp) protein (269aa)
Chromosome segregation ATPase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF44_CHLTF
chromosome segregation ATPase; K03496 chromosome partitioning protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
chromosome segregation ATPase
13_1_40cm_2_scaffold_1818_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11252..12169
DNA (918bp) protein (306aa)
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family id=12554738 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
chromosome segregation DNA-binding protein
13_1_40cm_2_scaffold_1818_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

12279..12692
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Putative uncharacterized protein id=4713772 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
13_1_40cm_2_scaffold_1818_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12871..14358)
DNA (1488bp) protein (496aa)
Rhomboid-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ33_KORVE rbh
rhomboid-like protein
Rhomboid-like protein {ECO:0000313|EMBL:ABF41017.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_2_scaffold_1818_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14665..15522
DNA (858bp) protein (286aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV64_KORVE
phosphoribosylamine--glycine ligase
13_1_40cm_2_scaffold_1818_16
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15495..15884
DNA (390bp) protein (130aa)
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
Phosphoribosylamine--glycine ligase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8W5_ACIC5
13_1_40cm_2_scaffold_1818_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15890..16309
DNA (420bp) protein (140aa)
molybdenum cofactor sulfurase domain containing protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
molybdenum cofactor sulfurase domain containing protein id=1246600 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
molybdenum cofactor sulfurase domain containing protein
13_1_40cm_2_scaffold_1818_18
unknown

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comp(16311..17249)
DNA (939bp) protein (313aa)

This feature has no annotations

13_1_40cm_2_scaffold_1818_19
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17553..18107
DNA (555bp) protein (185aa)
hypothetical protein, partial n=1 Tax=Blautia producta RepID=UPI00036A6CDB
Pentapeptide repeat-containing protein {ECO:0000313|EMBL:EMA24630.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula a
hypothetical protein
13_1_40cm_2_scaffold_1818_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18411..18653)
DNA (243bp) protein (81aa)
Alkylhydroperoxidase AhpD id=2961522 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alkylhydroperoxidase AhpD Tax=GWC2_Rokubacteria_70_16_curated
alkylhydroperoxidase
13_1_40cm_2_scaffold_1818_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18813..21743
DNA (2931bp) protein (977aa)
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_70_23_curated
AMP-dependent synthetase and ligase id=3488728 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
putative acetyltransferase
Displaying 21 items

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