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13_1_40cm_3_scaffold_2347

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_2347_1
unknown

Not on your lists

comp(3..212)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_3_scaffold_2347_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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286..1092
DNA (807bp) protein (269aa)
Probable dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYR5_THERP
WcaA; glycosyltransferases Tax=RBG_16_Planctomycetes_55_9_curated
putative dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis
13_1_40cm_3_scaffold_2347_3
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

1127..1846
DNA (720bp) protein (240aa)
Methyltransferase family protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9R7Y5_9CYAN
type 11 methyltransferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
methyltransferase family protein
13_1_40cm_3_scaffold_2347_4
unknown

Not on your lists

1849..3015
DNA (1167bp) protein (389aa)

This feature has no annotations

13_1_40cm_3_scaffold_2347_5
unknown

Not on your lists

3050..3325
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_3_scaffold_2347_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3350..5836)
DNA (2487bp) protein (829aa)
Transcriptional regulator, LuxR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARX2_RUBXD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABG05856.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_3_scaffold_2347_7
unknown

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5940..6581
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_3_scaffold_2347_8
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6619..7458
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBD9_THEBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG88499.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993
13_1_40cm_3_scaffold_2347_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7474..8331)
DNA (858bp) protein (286aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTQ8_ACIC1
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:ABK52818.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;"
13_1_40cm_3_scaffold_2347_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(8408..9166)
DNA (759bp) protein (253aa)
Polysaccharide deacetylase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY19_THERP
polysaccharide deacetylase family protein
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:ACM05662.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium
13_1_40cm_3_scaffold_2347_11
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9836..11062
DNA (1227bp) protein (409aa)
Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK45_THEYD
leu/ile/val-binding protein
Leu/ile/val-binding protein {ECO:0000313|EMBL:ACI21571.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (
13_1_40cm_3_scaffold_2347_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11084..11953
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000375163B
Uncharacterized protein {ECO:0000313|EMBL:EKS28638.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
branched-chain amino acid ABC transporter permease
13_1_40cm_3_scaffold_2347_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11962..13134
DNA (1173bp) protein (391aa)
Putative high-affinity branched-chain amino acid transporter membrane protein n=2 Tax=Bordetella bronchiseptica RepID=K0MFP8_BORBM
high-affinity branched-chain amino acid transporter membrane protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KDD55427.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordete
13_1_40cm_3_scaffold_2347_14
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13272..13742
DNA (471bp) protein (157aa)
ABC transporter n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000375DD13
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_13_Deltaproteobacteria_51_10_curated
ABC transporter-like protein
13_1_40cm_3_scaffold_2347_15
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13720..14448
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000378CACB
ABC transporter {ECO:0000313|EMBL:EIM71646.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibio
ABC transporter
13_1_40cm_3_scaffold_2347_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14460..14840)
DNA (381bp) protein (127aa)
seg 21..36 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
seg 21..36 id=72564 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
13_1_40cm_3_scaffold_2347_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14847..15590)
DNA (744bp) protein (248aa)
Methyltransferase type 11 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6S9_THECD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACY98333.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (s
13_1_40cm_3_scaffold_2347_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(15580..16626)
DNA (1047bp) protein (349aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ26_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH87611.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
major facilitator superfamily protein
Displaying 18 items

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