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13_1_40cm_3_scaffold_12188_8

Organism: 13_1_40CM_3_Deltaproteobacteria_71_4

partial RP 25 / 55 BSCG 24 / 51 ASCG 2 / 38
Location: 7327..8298

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 287.0
  • Bit_score: 252
  • Evalue 8.40e-64
Transcription-repair coupling factor id=1801652 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 310.0
  • Bit_score: 255
  • Evalue 5.40e-65
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 280.0
  • Bit_score: 189
  • Evalue 1.40e-45

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Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGGATCCCTCGTCGCGCGCCGCGGCGCGTGTCGCCCCGCCCACTCCCATGTCGGCCTCGCTGAGCGACGTCGTCGCGCGCCTGGAGCGCGCCGTCGAGGGGACCACGCCGGTCCGGGTCGCCGGGCTGCGCGGTAGCGGACCGGCGCTCTGCCTCGCACAGCTCCTCGCCCGACGCCAGCGGACCGCGGTCGTCGTCGCGGCAACGGCGGCGGAGGCCGAGGCCTTTGCGGGCGACCTGCGGTTTCTCCTGGGCGACGAGGCGGCGTCCACGCCGCTCGCCCGGCGGGTGCACTACGTCCCGGGATGGGAGGTGCCGCCCTTCGAGCCGCTCTCGCCGACCCGGGAGACGGTCGCGGCACGCGCGGAGGGCCTCTACCACCTGGTGCACACCGTCGCGCCCATCGTCGTGACCACCGCCGAGGCGTGGGCGCTTCGCTGTCTGCCGCGGACCGAGTTCGCCGCCGCGGTCACGTACGTGGTCGCCGGCGAGACGATCGCGCCGGACGCGCTCGTCGCGCGCCTCGTCGAGTGGGGGTATCACCGCGTGCCGCTCGTCCAGGACCCGGGCGACCTCTCGCTGCGCGGCGGCATCCTCGACGTCTTCCCGGTCGGCTATGGCGAGCCGGCCCGGCTGGAATTCCTGGCTGACACCATCGAGAGCCTCCGCGCTTTCGACCCGACGTCGCAGCGGTCGCTCGGCCCGGTCGAGGAGCTGCTCCTCCTGCCGGTCGCCGAGTTCGGGCGCGCGCGTCTCGGCGCCGACACCGCCCGCGCGGTCGACGACCGTGCCGCGGAGCTCGGGCTCGCGCGACGGGAGCGTCGCGAGCTCGTCGAGAGCGTGCGTTCCGGACTGTTGCTGCCCGGCGCCGAGTTCCTGCTTCCCTACCTCTATCCCGAGCTCGCCCGGATGGCGGACTACCTGCCCGGAGATACCGTCGTCTGGCTGCAGGTCCCCGCCGAGGTCGAGGCT
PROTEIN sequence
Length: 324
MDPSSRAAARVAPPTPMSASLSDVVARLERAVEGTTPVRVAGLRGSGPALCLAQLLARRQRTAVVVAATAAEAEAFAGDLRFLLGDEAASTPLARRVHYVPGWEVPPFEPLSPTRETVAARAEGLYHLVHTVAPIVVTTAEAWALRCLPRTEFAAAVTYVVAGETIAPDALVARLVEWGYHRVPLVQDPGDLSLRGGILDVFPVGYGEPARLEFLADTIESLRAFDPTSQRSLGPVEELLLLPVAEFGRARLGADTARAVDDRAAELGLARRERRELVESVRSGLLLPGAEFLLPYLYPELARMADYLPGDTVVWLQVPAEVEA