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13_1_40cm_4_scaffold_2369_15

Organism: 13_1_40CM_4_Chloroflexi_68_4

partial RP 41 / 55 MC: 4 BSCG 39 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 11670..12797

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC id=4832832 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 354.0
  • Bit_score: 311
  • Evalue 9.70e-82
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 353.0
  • Bit_score: 311
  • Evalue 1.40e-81
pilC; type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 360.0
  • Bit_score: 268
  • Evalue 3.50e-69

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1128
ATGTCTTCCTCGCCTAGAACGCGCGCGGTCCACAAAACGCCCGCGAAGAAGAAGGAGCCGTTCGCGCTCCACCGCGCGCTCCCGTCGTTCTTCAAGCCGAGCGCGATGGACCTGGTCTTGTTCTCGCGCCAGCTCGCGGTCTTTCTTCGCGCCGGCGTTCCCCTGGTCCCGGCGGTGGAGGCGCTGGCGGAGCAGGCGTCGAACCCGACCCTGCGCGACACGCTGTATCTCGTTCGCGACGACCTCATCAGCGGCGATCCGATCTCGGCGGCGCTCGGCAACCGGCCCGCAGCGTTTCCCCGGCTCTACGTCGACATGGTCCGCGCCGGCGAGGCGACGGGCCGCCTCGATACCGTGCTCACGCAGGTTGCCGATCAAATGGAGCGAGGCGCCTCCGCTCGGCGCCGGCTGATGGCGGCAATGCTCTATCCGGCGCTGGTGATCCTGCTGGCGATGCTCATGGTCGTGGTGATGGTGGTGTTCGTCCTGCCATCCATGGCGGGGCTCTTCCGTGAGTTCGACACCGAGCTCCCGTTGCCCACGCAGGTGGTCCTGGGCGTGGCGGCGTTCGCGCGCGATTGGGGCCTTGCATCGATCCTCGGCTTCATCGCGTTCGTGGTGTTCTGCTTCCTCTTCGCGAGGACGCCCCGCGGACGCCGCGTCTTCGACCGTGTCGGGCTCGCGCTGCCCGTCATCGGATCGATCGCGCGCGACGCGATCGTCGAGCGCACCACCAGGACTCTCGGCACGCTGCTCGCTGCCGGAGTTCCGCTCGTCCAGGCGGTCGAGCTCGTGCGCGACACGACCGGGAACAGCGTCTACCGCAGGCATCTCGACCATGTCCGCACCCAGATGCTGCAGGGCGAGGGCTTCGCGGAGCCGTTCGCTTCCAGCAAGCTGTTCCCGCCCCTCGTGCGCCAGATGGCGCGAGTGGGGGAGCGCACCGGGACGCTCGACCAGTTCATGCGCGAGGCCGCCGATTACTACACGCAAGAGCTCGAGCTCAAGCTCGAGACGGCGCTCCAGCTCCTCGAGCCCGCGCTGACCGTAATCGTGGCGTTCATGGTCGGCTTCGTGGCCTTGAGCGTGATCATGCCGATCTACTCGCTCATCGGGAACATCAAATAA
PROTEIN sequence
Length: 376
MSSSPRTRAVHKTPAKKKEPFALHRALPSFFKPSAMDLVLFSRQLAVFLRAGVPLVPAVEALAEQASNPTLRDTLYLVRDDLISGDPISAALGNRPAAFPRLYVDMVRAGEATGRLDTVLTQVADQMERGASARRRLMAAMLYPALVILLAMLMVVVMVVFVLPSMAGLFREFDTELPLPTQVVLGVAAFARDWGLASILGFIAFVVFCFLFARTPRGRRVFDRVGLALPVIGSIARDAIVERTTRTLGTLLAAGVPLVQAVELVRDTTGNSVYRRHLDHVRTQMLQGEGFAEPFASSKLFPPLVRQMARVGERTGTLDQFMREAADYYTQELELKLETALQLLEPALTVIVAFMVGFVALSVIMPIYSLIGNIK*