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13_1_40cm_4_scaffold_4253_3

Organism: 13_1_40CM_4_Acidobacteria_69_4

partial RP 15 / 55 BSCG 19 / 51 ASCG 7 / 38
Location: 1014..2474

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 482.0
  • Bit_score: 555
  • Evalue 5.40e-155
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor id=12554063 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 484.0
  • Bit_score: 548
  • Evalue 8.00e-153
rpoN; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 488.0
  • Bit_score: 442
  • Evalue 1.30e-121

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Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGCGCTCGAGCAAAAACTGAATCTGCGGATGACGCAGAAGCTCATCATGACGCCGTCGCTGCAGCAGGCGATCAAGCTCCTGCAGATGACGAAGCTCGAGCTTCAGGAGGAGGTCACCCAGGAGCTCACCGAGAACCCGCTCCTCGAGGAGCTGCAGGAAAGTACCACGGAGGCGGACAAGCCGGAAGGGGACGACGGCCAGCCCGTCGAAGGCGCCGCCACCGCAGACGCCGAGGTCCCTGAGAGGGAGCCGGAGCGCGACTCCTTCGACGAGATCGATTACGAGTCCTACTTCCAGGACTACATGGACCTCAGCTACCGCCCGCAGACGCCGGCGGAGGAGATCGAGACGCCGCCGCTCGAGAACATCCTGAGCAAGCCGCAGAGCCTCTCCGATCACCTGCTCTGGCAGCTCGACATGAGCATCGTGCCGGCGGGACAGAAGGAGATCGCCCGCGCCATCATCGGCAACCTGGACGACGATGGATACTTGAGGGTGTCGCTCCAGGACATCGCCGCCATGGGCCCCTGGTCGCTGCAGGACGTGGAGCACGCCCTGCATTTCGTCCAGGAGTTCGACCCGCCGGGAGTTGGCGCGCGCGACCTGAAGGAGTGCCTGTCGATTCAGCTGTCGTTCCATGACATGGAGGGCACGCCGGCGGAGACGATCGTGAAGGATCACATGGCCCTCCTGCAGGGGCGCAGGTTCAAGGACCTGGCGCAGGTGCTGGGCTGCAGCGTCGAGGAGGTGATGCACTACGTCGACACCATCCGCCACCTCGATCCGAAGCCGGGCAAGAAGTACAACGCCGGCAGCAACAACTACGTCATCCCGGACGTGTACGTCCTGAAGGTGGACAAGGGGTACACGATCGTGCTCAACGAAGAGGGCCTGCCGCGCCTGCGGATAAGCCCTTTTTACCGCCGCATGATCGACCGCAACAACACCGACGTCACGCGGGAGACGCGCGAGTACGTGCGCGAGAAATTCCGCTCCGCCTTCCGGCTGATCAAGAGCCTGGAGGAGAGGCAGCGCACCATCTACAAGGTCGCGAAGAGCATCGTCAAGCACCAGCAGGGGTTCCTGGACCTCGGCTACGAGCACCTGAGGCCGCTCATCCTCAAGGATGTCGCGGACGACATCGGCATGCACGAATCGACCGTCAGCCGCGTGGTCAACCACAAGTACATGCACACGCCGCGCGGCCTGTTCGAGATGAAGTTCTTCTTCCACTCGAGCATCAGCTCCACGCAGGGCCAGGACGTCTCCTCGCTGACGGTCAAGGAGCGCATCAAGAAGGTGGTGAGCGAGGAGGACGCGCGGCGGCCGCTCTCCGACGCCGCCATCGTGCAGATACTGAGCGACGACGGGCTGCGCATCGCGCGGCGCACCGTGGCCAAGTACCGCGAGGAGTTGCGCATACCGTCCTCCAACGAGAGGCGCCAGGGTTTCAGCTGA
PROTEIN sequence
Length: 487
MALEQKLNLRMTQKLIMTPSLQQAIKLLQMTKLELQEEVTQELTENPLLEELQESTTEADKPEGDDGQPVEGAATADAEVPEREPERDSFDEIDYESYFQDYMDLSYRPQTPAEEIETPPLENILSKPQSLSDHLLWQLDMSIVPAGQKEIARAIIGNLDDDGYLRVSLQDIAAMGPWSLQDVEHALHFVQEFDPPGVGARDLKECLSIQLSFHDMEGTPAETIVKDHMALLQGRRFKDLAQVLGCSVEEVMHYVDTIRHLDPKPGKKYNAGSNNYVIPDVYVLKVDKGYTIVLNEEGLPRLRISPFYRRMIDRNNTDVTRETREYVREKFRSAFRLIKSLEERQRTIYKVAKSIVKHQQGFLDLGYEHLRPLILKDVADDIGMHESTVSRVVNHKYMHTPRGLFEMKFFFHSSISSTQGQDVSSLTVKERIKKVVSEEDARRPLSDAAIVQILSDDGLRIARRTVAKYREELRIPSSNERRQGFS*