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13_1_40cm_3_scaffold_3523

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3523_1
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..3029
DNA (3027bp) protein (1009aa)
Peptide/opine/nickel ABC uptake transporter, substrate-binding protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILR0_NITGG rbh
putative solute binding protein rbh
Putative solute binding protein {ECO:0000313|EMBL:AIF82851.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_3_scaffold_3523_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3114..4070
DNA (957bp) protein (319aa)
Peptide/opine/nickel ABC uptake transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE21_NITGG
appB; peptide/opine/nickel ABC uptake transporter permease
Peptide/opine/nickel ABC uptake transporter, permease protein {ECO:0000313|EMBL:AFU59611.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nit
13_1_40cm_3_scaffold_3523_3
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4552..5397
DNA (846bp) protein (282aa)
Peptide/opine/nickel ABC uptake transporter, permease protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II52_NITGG
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AIF82849.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososp
13_1_40cm_3_scaffold_3523_4

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comp(5549..5941)
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=uncultured archaeon RepID=I3RKJ9_9ARCH
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
eIF-5A; translation initiation factor 5A
13_1_40cm_3_scaffold_3523_5

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comp(5997..6578)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=uncultured archaeon RepID=I3RKJ7_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:AFK24857.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
13_1_40cm_3_scaffold_3523_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6671..7633)
DNA (963bp) protein (321aa)
Putative CorA ion transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ6_NITGG rbh
corA; CorA ion transporter
Putative CorA ion transporter {ECO:0000313|EMBL:AFU59607.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_3_scaffold_3523_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7684..8640)
DNA (957bp) protein (319aa)
Putative glycosyl transferase, family 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE13_NITGG rbh
glycosyl transferase, family 2 rbh
Putative glycosyl transferase, family 2 {ECO:0000313|EMBL:AFU59606.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_3_scaffold_3523_8

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8808..9623
DNA (816bp) protein (272aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon
hemB2; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=uncultured archaeon RepID=I3RKJ4_9ARCH rbh
13_1_40cm_3_scaffold_3523_9

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9871..11262
DNA (1392bp) protein (464aa)
Aldehyde dehydrogenase family protein n=1 Tax=uncultured archaeon RepID=I3RKJ3_9ARCH rbh
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:AFK24853.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
gabD; succinate-semialdehyde dehydrogenase
13_1_40cm_3_scaffold_3523_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11378..11707
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59602.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_3523_11

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comp(11719..12171)
DNA (453bp) protein (151aa)
adh4; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
Zn-dependent alcohol dehydrogenase n=1 Tax=uncultured archaeon RepID=I3RKJ1_9ARCH
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFK24851.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_3_scaffold_3523_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12110..12745)
DNA (636bp) protein (212aa)
adh4; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFU59601.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU59601.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
NAD-dependent alcohol dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE04_NITGG
13_1_40cm_3_scaffold_3523_13

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comp(12913..13230)
DNA (318bp) protein (106aa)
fumC; fumarate hydratase (EC:4.3.1.1)
Putative fumarase or aspartate-ammonia lyase (Fragment) n=1 Tax=uncultured archaeon RepID=I3RKI9_9ARCH
Putative fumarase or aspartate-ammonia lyase {ECO:0000313|EMBL:AFK24849.1}; Flags: Fragment;; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Displaying 13 items

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