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SCNpilot_BF_INOC_scaffold_331_34

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(39255..40196)

Top 3 Functional Annotations

Value Algorithm Source
rsmH; ribosomal RNA small subunit methyltransferase H RsmH (EC:2.1.1.199) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 300.0
  • Bit_score: 448
  • Evalue 1.60e-123
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 300.0
  • Bit_score: 448
  • Evalue 7.80e-123
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Variovorax paradoxus B4 RepID=T1X706_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 304.0
  • Bit_score: 448
  • Evalue 4.20e-123

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GTGAACGCATGGTCACACACCACGGTCCTGTTGAACGAGGCGGTCGACGCCCTGGTCACGGACCCGCGCGGTCAGTACGTGGACGCCACGTTCGGCCGTGGCGGACATGCGCGCCTGATCCTGCGGCGGCTGGCGCCCGAGGGGCGGCTGATCGCTTTCGACAAGGATCCCGAGGCGCTGGCCGAGGCGGCGCGCATTCAGGACGCGCGCCTTGCCGTCCGCCACCAGGGTTTCGCGGCGCTGGCCGAGTGGCCGCCGCGCAGCGTGGCGGGGGTGTTGATGGATCTGGGCATCAGCTCGCCACAGATCGACAACCCCGCACGGGGTTTTTCTTTTCGTGCCGACGGCCCGCTGGACATGCGCATGGACCCCACGCGCGGGCAGAGCGCGGCCGACTGGCTGGCCCATGCCGACGAGCGGCAGATTGCGCAGGTGATCCGTGACTACGGCGAGGAACGGTTTGCTGTCGCCATTGCAAAGGCGATTGTCGCTCGCCGACAGGCGGGGCGCGCTGTTGCATCCACCCTCGAGCTGGCCGAGCTCGTGGCTGGCGCGGTCAAAACCCGCGAGCCGGGCCAGAACCCTGCAACGCGCACATTTCAGGCTGTTCGGATTTTCGTCAACGCCGAGCTTGAAGAGCTCGAACAGGCGCTAGAGGCGGCCGTGCAGGTGCTGCAACCCGGAGGCCGGCTGGTGGTGATCAGCTTCCATTCCCTGGAAGACCGCATCGTCAAGCAGTTCATCGCCCGCCATGCGCGCCAGGCGGTGGACCGGCGCGCGCCGTTCGCCGAGCCGGCGCCCACCCTGCTGCGCGCCCTCGGCCGGGTGCGCCCCGGCGCCGCCGAGGTGGCCGCCAACCCGCGCGCGCGCAGCGCCATCATGCGCGTGGCCGAGCGCACGCCGGCGCCGCTGGCTGTCGCGCGGCAGGGAGGCCGGGCATGA
PROTEIN sequence
Length: 314
VNAWSHTTVLLNEAVDALVTDPRGQYVDATFGRGGHARLILRRLAPEGRLIAFDKDPEALAEAARIQDARLAVRHQGFAALAEWPPRSVAGVLMDLGISSPQIDNPARGFSFRADGPLDMRMDPTRGQSAADWLAHADERQIAQVIRDYGEERFAVAIAKAIVARRQAGRAVASTLELAELVAGAVKTREPGQNPATRTFQAVRIFVNAELEELEQALEAAVQVLQPGGRLVVISFHSLEDRIVKQFIARHARQAVDRRAPFAEPAPTLLRALGRVRPGAAEVAANPRARSAIMRVAERTPAPLAVARQGGRA*