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SCNpilot_BF_INOC_scaffold_10530_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 2516..4279

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, solute-binding protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B623_RUMGN similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 506.0
  • Bit_score: 537
  • Evalue 2.20e-149
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDN76575.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus AT similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 506.0
  • Bit_score: 537
  • Evalue 3.10e-149
Transcriptional regulators similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 593.0
  • Bit_score: 295
  • Evalue 4.10e-77

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Taxonomy

[Ruminococcus] gnavus → Blautia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1764
ATGACGCAGGTTCTGTTAAACTCCGATTATAAGAAAATCTATCTGATGTCCGGGCCACTGCGCTATACCAGTGAATCGGAGTGTGTCAAGGGATTTACGGAAGCGTATGAGAACGCAAACCGCACGCCGCACACGGATGCTATCATCCATACCGACTTAAACAAAGAAGATGCGTTTCGCAAGATTACCGGCCTGCTCAAAAAAGATATTCCCGATATCGTGATGACCACGTCCGAAACCATCGCAAACGGTGTGATCGAGGGGCTACATATCCTTGGTTACTCCACCCAGAATATCCCCGTCGTTACCTTGGGTGAGGAGCATTGGAACAAGTATACGCGTTCGTTTGCGAATTTTTCGACCGCGCGCCCGGCCATGAAGCTCGGCGCAAAGGCCGCAAATTTACTGGTAGAAAAACTCCAGTCACCGCAGCTTCAGGAAAGCGATCAGATTATCCTCAACTCCAACGGCACGCACGACGCTTCCATGATTCTATCCGCGCTGAAGACTTCGCCGCTCGCGCAGCCGAGCGTCACCACCGTCGGCAAAAAGAACAGCATCCGAATCCTGATGCTCGACACTCCGCTCGTGCATTCCTTTCATGGTTTGCTTCGAAATTTTGAAACGCAGACCGGCATTCGCGTGGATATTACGATTTTGCAGCATCATCGCCTCTATGATGCCATCGTGGAAAGCAGCCTCAGCGACAAAGAGGAAAACCGTTACGACGTCTATATGTATGATATCCCGTGGTTGGGTATGTTGGCAAATCAGGGGATATTGGCCGATATCTCCAGCTTTATGCATACGATTGATGTATCGAAATTCTTACCCGGCAGCCTGGAATATTTTTCCAAGTTTCAAGATAAGTATTTCGGGCTTCCGTTCATGTATGCGCCGCAAATCCTCTATTATCGAAAGGATTTATTCGACAACCCCGCATTGAGAAATCAATTTGAAAAGCAGTTCGGCTCTCAGCTTCGTCCGCCCGTCAGCCTGAGAGAATATAATGCAATGGCTGAGTTTTTTACGAGCAAAACGAGCGCGATCCCATACGGCGTATCGATTCCCGCCGCATATGATGAGTGCCTTGCGCCGGAACTGTATATGCGCCTGCGTTCCTACGGCAGCGAGATCATCGACAGCAACGGAAATGTCGTCTTTGATAATCCGAAGACGCTCAAAGCCTACATCAACTTCATGCAGATTCTGCGTTTTGCCAAGCCGGATTACCTCAACGCGAACGATGTCAGCATTGTCGATAGTTTCCTCAGCGGAGAAACAGCAATGCTCATCTCCTACCCGTCGTTTTTAACCGACATCAACGACCTGCGCAAAAGCAGCATGATCGGGTCAATCGGATACAGCCATATCCCCGGAAACAGCCCGCTGCTCGGCGGATGGAGCCTTGGCGTTGCGGAGCGCTCCACAAACAAAGACAGCGCGATGGCCTTCATCCGCTGGACCTGCAATGAGCAGATGGATAACTACTTTGCGCTGCTGGGCGGACAATCGGCAATCACCCGCACATATACCAATGATGAGCTGGTCAAGTTTTACCCCTGGCTTCCGCTCTATCGATCGGTCTATAGCTATACAAAGCCCATGCTCCCGCCGATTATCCGCAACGGGCAGGTGATGTCCCCCAACGCCATCGACGCCATCATCTGCAAATGGGCCTATCAGCTGATCAACGGCAACGCCGCAATCGAAGAGGTCATCCCTTCCACCCAAAAAGAGCTGGAACGCTTCATGAATCAATAA
PROTEIN sequence
Length: 588
MTQVLLNSDYKKIYLMSGPLRYTSESECVKGFTEAYENANRTPHTDAIIHTDLNKEDAFRKITGLLKKDIPDIVMTTSETIANGVIEGLHILGYSTQNIPVVTLGEEHWNKYTRSFANFSTARPAMKLGAKAANLLVEKLQSPQLQESDQIILNSNGTHDASMILSALKTSPLAQPSVTTVGKKNSIRILMLDTPLVHSFHGLLRNFETQTGIRVDITILQHHRLYDAIVESSLSDKEENRYDVYMYDIPWLGMLANQGILADISSFMHTIDVSKFLPGSLEYFSKFQDKYFGLPFMYAPQILYYRKDLFDNPALRNQFEKQFGSQLRPPVSLREYNAMAEFFTSKTSAIPYGVSIPAAYDECLAPELYMRLRSYGSEIIDSNGNVVFDNPKTLKAYINFMQILRFAKPDYLNANDVSIVDSFLSGETAMLISYPSFLTDINDLRKSSMIGSIGYSHIPGNSPLLGGWSLGVAERSTNKDSAMAFIRWTCNEQMDNYFALLGGQSAITRTYTNDELVKFYPWLPLYRSVYSYTKPMLPPIIRNGQVMSPNAIDAIICKWAYQLINGNAAIEEVIPSTQKELERFMNQ*