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SCNpilot_BF_INOC_scaffold_1551_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(5530..6402)

Top 3 Functional Annotations

Value Algorithm Source
R3H domain protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DRF1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 313.0
  • Bit_score: 231
  • Evalue 9.80e-58
R3H domain protein {ECO:0000313|EMBL:CDA90190.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus s similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 313.0
  • Bit_score: 231
  • Evalue 1.40e-57
single-stranded nucleic acid binding R3H domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 172.0
  • Bit_score: 185
  • Evalue 1.70e-44

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Taxonomy

Ruminococcus sp. CAG:563 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGATAAAAGAAGCGATTGCGACCGGGAGCACCATAGATGCGGCAAAAGAAGCAGCTGTTTTATTGTTGGGTGCCAGAGAAGATGACAACATCGAGTTTGAAATTATTGATTTGCCCCAAAAGAAATCCTTTGGTTTGTTTGGCGGTGCCGCTGCAAAGGTAAGAGCATATATCGAGCTACCGGATGAAAAAGAAGTACAAGCACCCGCGGTGGTTGAGAAAAAGGAATTCAAAGCAAAACCGGAGAAAAAGGCAGAGCAGAAAAAAGAAAGCAAAGTTCCCCTTTCCCCGGCCAATACCGATGCTGCAGAAACCTATTTGTTGGCGGTATTGAAGCAGTTGGGTGTTACCGATATAACGTTATCCAAAAAGAAGACCGAAAGCGGTACTGAATTTGACATTGAAGCAGAAGGCTTGGGAATTGTCATCGGCCGCAGAGGAGATACCCTGGAAGCGCTCCAGCATCTTGTGAGCTTGGTCGCCAACAAGGGCGAAGCCGATTATAACAGAATTACCATCAATCCCGGGAATTATCGGGAAAAACGGGAAGGGACCCTTCAGTCCATTGCCCGCCGTTCTGCACAACAAGCCATCAAATACGGTAAAAATGTTGTGCTGGAACCCATGAACTCCTACGAGCGCCGGATCATCCACACCGCAGTGCAGGAAATCAACGGTGCCTCCAGCTGGTCCATCGGGGAAAACGAAAACAGACGTGTCTGCATCGGAACCCCGAGAAAAGATAGACCGGGCTATGAGAAGCGGGACAGAGGCAATAACAACAATCGCAGCAACCAAAGCTTTCAAAACAATAAACGAGAACCAAAGAAGGATATTAACAACGCTCCGCTGTATGGGCGTATTGATAAATAA
PROTEIN sequence
Length: 291
MIKEAIATGSTIDAAKEAAVLLLGAREDDNIEFEIIDLPQKKSFGLFGGAAAKVRAYIELPDEKEVQAPAVVEKKEFKAKPEKKAEQKKESKVPLSPANTDAAETYLLAVLKQLGVTDITLSKKKTESGTEFDIEAEGLGIVIGRRGDTLEALQHLVSLVANKGEADYNRITINPGNYREKREGTLQSIARRSAQQAIKYGKNVVLEPMNSYERRIIHTAVQEINGASSWSIGENENRRVCIGTPRKDRPGYEKRDRGNNNNRSNQSFQNNKREPKKDINNAPLYGRIDK*