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SCNpilot_BF_INOC_scaffold_1738_8

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 3400..4026

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7B4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 208.0
  • Bit_score: 311
  • Evalue 5.40e-82
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Rumi similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 208.0
  • Bit_score: 311
  • Evalue 7.50e-82
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 302
  • Evalue 7.00e-80

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Taxonomy

Ruminococcus sp. CAG:177 → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 627
ATGGCAAGATATACTGACGCAGTATGCAGACAGTGTCGTCGTGAAGGACAGAAATTGTTTTTGAAAGGTGAGCGCTGCTATTCTGCAAAATGCGGAATCACACGCAGAACCTACGCACCGGGTCAACACGGCCAGGGACGTAAAAAAATATCCGAATACGGACTTCAGTTCCGTACCAAACAAAAAGCAAAGCATTATTATGGTGTGCTTGAAAAACAATTCCATCATTATTTTGAAATGGCTGAAAACAAGCAGGGAATTACAGGTGAAAACCTTCTTAAATTGCTGGAAAGCCGTTTGGATAATGTGGCTTATAGATTGGGTTGGGCTTCGTCCCGTCCGGAAGCAAGACAGCTTGTTGTTCACGGTCACTTTACCGTAAACGGCAAGAAGGTCAATATTCCTTCCTATTTATTGAAAGCCGGAGATGTGATTTCCATTAAGGAAAAGAGCAGACAAAGTGAAAAGTTCAAATCCGTTCTTGAAGGCAGTGGGGGACGTCCTGTTCCGAAATGGCTTGATAAGAATGCTTCTACAGCGGAAGCAAAGGTTATCAACCTTCCTGCACGTGATGAGATTGACTTTGAGGTTGAAGAGCATCTTATCGTTGAGTATTACTCTAAGTAA
PROTEIN sequence
Length: 209
MARYTDAVCRQCRREGQKLFLKGERCYSAKCGITRRTYAPGQHGQGRKKISEYGLQFRTKQKAKHYYGVLEKQFHHYFEMAENKQGITGENLLKLLESRLDNVAYRLGWASSRPEARQLVVHGHFTVNGKKVNIPSYLLKAGDVISIKEKSRQSEKFKSVLEGSGGRPVPKWLDKNASTAEAKVINLPARDEIDFEVEEHLIVEYYSK*