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SCNpilot_BF_INOC_scaffold_2050_38

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 35127..35708

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036DF2E5 similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 197.0
  • Bit_score: 155
  • Evalue 4.60e-35
RNA polymerase sigma-H factor similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 153
  • Evalue 4.90e-35
RNA polymerase sigma-H factor {ECO:0000313|EMBL:AFI26639.1}; TaxID=1127744 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JS.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 201.0
  • Bit_score: 153
  • Evalue 2.40e-34

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Taxonomy

Bacillus sp. JS → Bacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCGAAAAGCGGAGAAAAAGATAATTTAAAATTATCTGATGAACAGCTTGCCGAACGGGCTCGCTGTGGGGATAATGATGCTTTCTCTGCACTGGTAGCAAGATATGTTTTCACCGTAAAATCACGGGCCAATCACTATAACGGTTCAGGCATCGATCCTGAAGATTTGGCACAGGAGGGTACGATCGGGCTTATGGCTGCGGTACGCAGCTATGACAAGGAGCTGGGAACCAGCTTTCGTACATTCGCCTGGCTTTGTATCGACCGAAGTATTTTATCCGTTGTAAAGGCCAGCCTTCGTAAAAAACAAATTCCAAAAGCTTCTCTTGTTTCGATAGACGATAATGATTTAGACAATTGTTTTTTCGATGGAAAAGATAATCCAGAAACTTTATTGATTGAAAATGAGGATATCGCTCTTTTTGAGCTGAAAATTAATGAACTTCTGTCCCCGTTTGAACGTAAAGTTTTACGTTACTATCTTAGCGGCAAAAACTATAGTGAAATAGCCGACAGCCTTAACACCCTACCGAAATCGGTAGACAATGCACTGCAGCGCGTGAGGCATAAACTGAGATAA
PROTEIN sequence
Length: 194
MAKSGEKDNLKLSDEQLAERARCGDNDAFSALVARYVFTVKSRANHYNGSGIDPEDLAQEGTIGLMAAVRSYDKELGTSFRTFAWLCIDRSILSVVKASLRKKQIPKASLVSIDDNDLDNCFFDGKDNPETLLIENEDIALFELKINELLSPFERKVLRYYLSGKNYSEIADSLNTLPKSVDNALQRVRHKLR*