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SCNpilot_BF_INOC_scaffold_2266_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3752..4225)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6K9_ETHHY similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 157.0
  • Bit_score: 221
  • Evalue 5.50e-55
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 157.0
  • Bit_score: 220
  • Evalue 3.50e-55
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=663278 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 157.0
  • Bit_score: 220
  • Evalue 1.70e-54

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Taxonomy

Ethanoligenens harbinense → Ethanoligenens → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 474
TTGACAAAACAATTTATCTTAACCGACGACGGTCTTAAAAAATACGAAAAAGAGCTGGACGAATTAAAAACCGTTACCCGCAAGGAGATTGCGGAAAAAATCAAGGTAGCTCTGTCCTTTGGCGATCTGTCGGAAAACAGCGAGTATGACGAGGCCAAAAATGAACAGGCCAAGGTGGAAAACCGCATTTTAGAACTGGAAGCCATGCTGAAAAATGCCAAAGTCATTGATGAGGATGAGCTTTCCACTGAAACTGTCAATGTGGGCTCTAAAATCACAGTGCTTGATGTGGAATACAACGAGCAGGTGGAATACCAGCTGGTGGGTTCCGCAGAAGCCGATCCCAAGCAGGGCAGGATTTCAGACGAATCCCCCATCGGCAAGGCTTTGATCGGACACAAGGTCGGTGAAACCGTTGCGGTGGAAGCACCCTCCGGACAGGTGTTATTTAAAATCCTTGAAATCTCAAGATAA
PROTEIN sequence
Length: 158
LTKQFILTDDGLKKYEKELDELKTVTRKEIAEKIKVALSFGDLSENSEYDEAKNEQAKVENRILELEAMLKNAKVIDEDELSTETVNVGSKITVLDVEYNEQVEYQLVGSAEADPKQGRISDESPIGKALIGHKVGETVAVEAPSGQVLFKILEISR*