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SCNpilot_BF_INOC_scaffold_3090_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(4983..5828)

Top 3 Functional Annotations

Value Algorithm Source
Transketolase, N-terminal subunit (EC:2.2.1.1) similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 279.0
  • Bit_score: 413
  • Evalue 6.50e-113
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DU99_CLOS4 similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 280.0
  • Bit_score: 418
  • Evalue 4.20e-114
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:ERJ00486.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 280.0
  • Bit_score: 418
  • Evalue 5.90e-114

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Taxonomy

Clostridium sp. ATCC 29733 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 846
ATGAACGAAACATTGAAAAAACAGCTGGAAGTCACTGCCTGTAAGGTGAGAATGGGTATCATTGAAGGTACCTATAACGCCAAATCAGGTCATCCGGGCGGATCCTTATCCATTGCGGAGCTGCTAACCTATCTCTATTTTGTTGAGATGAACATTGACCCGAAGGATCCCAAAAAGGCCGACCGTGACAGATTGGTGCTGTCAAAGGGACACACTGCACCGGCACTGTATGCTACCCTTGCGCTGAAGGGCTTTTTCCCCACAGATGAAATCAAGCTGCTTCGTAAAACCGGTAAAATGTTGCAAGGTCACCCGGACATGAAGGGGACACCAGGCGTTGATATGAGCACCGGCTCGCTGGGGCAAGGCATTTCCGCCGCATGCGGAATGGCGATTTCTGCCAAGCTGTCCGGCGACAGCTATCGGGTATACACCATTCTCGGCGACGGAGAAATTCAAGAAGGACAGGTTTGGGAAGCCGCTATGTTTGCAGGCTTTAAAAAGCTTGACAACCTGGTCGCCATTGTGGACAATAACAACCTGCAAATCGATGGCAGAGTTTCCGAGGTGATGTCCGTTTATCCCATCGGCGAGAAATTCAAAGCCTTCGGCTGGCATGTAATTGACATCAAAGGACACGATTTTGACGCTTTGGAAGAGGCATTCAACGAGGCAAAGACGATCAAGGACAAGCCGACCGTGATTGTTCAAACAAGTACAAAGGGCAAATGTGTTTCCTTTATGGAAGACAACGTGGAATGGCACGGCGCCGCACCGAACTGTGATCAATACGCATTGGCAGTGGAAGAGCTGAACGGTCAGCTTTCCGCAATGGAGGTAGAATAA
PROTEIN sequence
Length: 282
MNETLKKQLEVTACKVRMGIIEGTYNAKSGHPGGSLSIAELLTYLYFVEMNIDPKDPKKADRDRLVLSKGHTAPALYATLALKGFFPTDEIKLLRKTGKMLQGHPDMKGTPGVDMSTGSLGQGISAACGMAISAKLSGDSYRVYTILGDGEIQEGQVWEAAMFAGFKKLDNLVAIVDNNNLQIDGRVSEVMSVYPIGEKFKAFGWHVIDIKGHDFDALEEAFNEAKTIKDKPTVIVQTSTKGKCVSFMEDNVEWHGAAPNCDQYALAVEELNGQLSAMEVE*