ggKbase home page

SCNpilot_BF_INOC_scaffold_4966_13

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: 9520..10401

Top 3 Functional Annotations

Value Algorithm Source
AraC-type DNA-binding domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FMY6_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 278.0
  • Bit_score: 230
  • Evalue 2.20e-57
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EMS73600.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Cl similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 278.0
  • Bit_score: 230
  • Evalue 3.10e-57
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 280.0
  • Bit_score: 224
  • Evalue 3.40e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 882
TTGAATACCATCAACGGGTTTATCAAAAGACAACATATGAAAAACGGGGACTATGAAATCTTTCACAGTCTGGATATTGATATTAAAAATTTTGATTACCATCATCATGATTTTTATGAAGTTTACTTTTTCATCGGCGGCAATGTCTCTTATGTGATAGAAGGGAAAAAATACCCCTTAATGCCCGGCGATATTATTTTACTGTCACCTTATGAACTGCATCAGGTCATCAATCATGATGAAACGGTACATTACGAACGTTTTGTTTTATGGATGAATGAAACAATGATTCGGAGCTTGTCCGACGAAACGACCGATCTTGGGCGGTGCTTTGACTCAAAAGCGGAAAATTTCCGCAGATTGATTCGTTTGAGTAAAAGCAGGTATACGAGTCTATTGAGCAGCTTTGACCGTTTATGCGACATTTTTTATGGAGAAAGCTTTGGAAAAGAACTGATGCAAAGAGCGTTGCTTACCCAGCTTTTAATTGAAATCAATGAGCTGCTGGACCAACAGGATTATAACGATGCTGATTTGGATATCACCCACAATGACTTCATCATCAATATCCTGAATTATATCACAAAAAATCTGACAGGGGATTTGTCCTTACAGCGTATATCCGATCATTTCTATATCAGCCAGTATCATTTGTGCCGTGAATTCAAAAAGAATATGGGGATTTCTATTCACAAATATGTTATTGGAAAACGACTAGCTTTGTCCAAACAGCTGATTGAAAAAGGACATAGCTTCAGCAGTGCTGCTGCCGGCAGCGGGTTTGTGGATTATACAGGCTTTTATCGCAGCTTTGTAAAGCAATATAAAATGAACCCCAAAGAATATGCAAAGAATATAAAAATCAACCCAGGGAATTCATAA
PROTEIN sequence
Length: 294
LNTINGFIKRQHMKNGDYEIFHSLDIDIKNFDYHHHDFYEVYFFIGGNVSYVIEGKKYPLMPGDIILLSPYELHQVINHDETVHYERFVLWMNETMIRSLSDETTDLGRCFDSKAENFRRLIRLSKSRYTSLLSSFDRLCDIFYGESFGKELMQRALLTQLLIEINELLDQQDYNDADLDITHNDFIINILNYITKNLTGDLSLQRISDHFYISQYHLCREFKKNMGISIHKYVIGKRLALSKQLIEKGHSFSSAAAGSGFVDYTGFYRSFVKQYKMNPKEYAKNIKINPGNS*