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SCNpilot_BF_INOC_scaffold_5762_5

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(3191..3925)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 239.0
  • Bit_score: 259
  • Evalue 4.00e-66
pseudouridylate synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 240.0
  • Bit_score: 240
  • Evalue 3.90e-61
tRNA pseudouridine synthase A n=1 Tax=Clostridium sp. CAG:413 RepID=R6NKJ4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 239.0
  • Bit_score: 259
  • Evalue 2.80e-66

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Taxonomy

Clostridium sp. CAG:413 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
ATGATCAGATATAAGGTTACCCTCTGCTTTATCGGCACGAACTACCACGGCTGGCAGGTTCAGAAAAATGCTGTGGCGATTCAGCAGGTTTTACAGGACAAGCTGCAAATTCTCCTCGGCACCCGCCCGGGTATCTCCGGCTGCAGCAGAACAGATACAGGCGTACACGCCAATATGTATTGTTTTCATATGGATTTAGACAGCGAAAAAGACGAAAATAAGCTGTTATATTCCATGAATGCACTGCTTCCTCGGGATATCGCCGTGAAATCCGTCGAAAAAGCCGGGGAAGGGTTTCATGCCAGATATTCTGTTGTCACAAAAGAATATATCTACAAAATCTGGAACGGCAGAGTGAGAAATCCTTTTTATGAGGGATTGTCCATCCACATCCGTCAACCTCTGGATATGGAAAAGATGAAAGAAGCATCATACTATTTCCTGGGAAAACATGATTTTTCTGCCTTTTGCTCGGCAGGTTCTGATGTTCTTGACACCACCCGTGAAATAAAAACGCTGAAGATAACAAAAGAAGAAGATTTGGTAACGATAACGGTAGAAGCAGACGGATTTTTATACAATATGGTACGGATCATTGTCGGCACGCTGCTTTTTGTGTCGGAAGGCAAAATAAAGCCCGGCGACATTCCTGATATCATAGCATCCAAGAACCGCAGAAAAGCAGGAAAAACAGCTCCTGCCAAAGGGCTTACTCTCAATCATATCCATTACTGA
PROTEIN sequence
Length: 245
MIRYKVTLCFIGTNYHGWQVQKNAVAIQQVLQDKLQILLGTRPGISGCSRTDTGVHANMYCFHMDLDSEKDENKLLYSMNALLPRDIAVKSVEKAGEGFHARYSVVTKEYIYKIWNGRVRNPFYEGLSIHIRQPLDMEKMKEASYYFLGKHDFSAFCSAGSDVLDTTREIKTLKITKEEDLVTITVEADGFLYNMVRIIVGTLLFVSEGKIKPGDIPDIIASKNRRKAGKTAPAKGLTLNHIHY*