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SCNpilot_BF_INOC_scaffold_6158_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1162..2385)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I425_CLOCE similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 407.0
  • Bit_score: 352
  • Evalue 7.00e-94
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 407.0
  • Bit_score: 352
  • Evalue 2.00e-94
  • rbh
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:ACL76458.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 407.0
  • Bit_score: 352
  • Evalue 9.80e-94

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Taxonomy

[Clostridium] cellulolyticum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCTTAAAGAAATGGATAAATACCGTGTTCTTTTTGAAGAAAAAATTCCTTTACTCAAGGAAAAAGTCTTGCATGACATAATGAGCGGCATCAGTATAACAGATTCAGTTTTGATGGAACTGAAATTGTATAAGATAAATATTAATAGGTTTGTTTTGGTGGTTGTAGAGTACGATTCGGAATTTGATAAATCGGATGATGGCCTGAATTTACATATTAATCACATGGGTATTATAAAATACTTTACTTCACTTTTTGATGAATTTGAAGTTATTCCCGTTATTTTAAATGTACGTCAGATTTGTATGATTATTAATATAGGCACTAATGATTACAATTATGATTATATATTTAATAGAGCTGTAAAGCTTCAGGAAAGTGTCAAAAATCTGTTTGGATTTACAATCAGCCTTGGTATCAGTTCGGTGGGTAACGATATTGTACACTTGCATGAAAAATTGAAGGAATGCCAGCGTGCGCTCAAGCATAAATCCCATACTGGAGATGATTCCGTAATTTCTTATAAAGATTTACATTTGTTTTTCAACTACGAGGATTATTCGGTTTTGGAGTCTCACAAAAGTGAACTTTTGGAAGCAATTCAGCTTGGCGAATTAGAATATGTCGATTCGTCCATAAATAGTTTATTTAAATATTTTGAAGAAAATGGCTTTTTGCTTAATAATGAGATTAAAAATTTCTACTGGAACATTATATCCTCCATCAACAATATAAGAATTTCGATTTTAAAGCATGAGACAAATGAACCCATAGAGAACTACGGCAGCATTGACAGTTTATGGCATTTAATTAAAAATTGTGAAAATATAAATGATTTAAACGAAATTTTATGCGACATAGCTCAAAATGTCACAAAAAAAGTAGAGGCTTTTAATAGTAAAAATATTAGCTTAAAGGTTCACACCATTATGGATTTTGTCGATAAGCATTTTGCGGAACAAATCACCTTAAATGACGTAAGTAAAAGTATTTTTGTTAGCACATATTATGCAAGCAGAATTTTTAAGAAAGAAACAGGGAAGAACTTTGTTGATTATCTTAATGAGGTAAGAATCGAAAAGGCAAAAGATTTTTTAAAGGATGTCCAATACAAAATTTATGAGGTTGCTGACTTAACCGGCATAACGGATGCTCATTATTTTTCAAGGTTATTTAGAAAATACACTGGAAAAACCCCTAGCGAATACCGAGATATGAACTAA
PROTEIN sequence
Length: 408
MLKEMDKYRVLFEEKIPLLKEKVLHDIMSGISITDSVLMELKLYKININRFVLVVVEYDSEFDKSDDGLNLHINHMGIIKYFTSLFDEFEVIPVILNVRQICMIINIGTNDYNYDYIFNRAVKLQESVKNLFGFTISLGISSVGNDIVHLHEKLKECQRALKHKSHTGDDSVISYKDLHLFFNYEDYSVLESHKSELLEAIQLGELEYVDSSINSLFKYFEENGFLLNNEIKNFYWNIISSINNIRISILKHETNEPIENYGSIDSLWHLIKNCENINDLNEILCDIAQNVTKKVEAFNSKNISLKVHTIMDFVDKHFAEQITLNDVSKSIFVSTYYASRIFKKETGKNFVDYLNEVRIEKAKDFLKDVQYKIYEVADLTGITDAHYFSRLFRKYTGKTPSEYRDMN*