Alias: ACD24_109838.6240.16
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD24_97_1
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
166..399
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=48 to=61)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=5.0)
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ACD24_97_2
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
522..671
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions 20..42 Tax=RBG_16_WWE3_37_10_curated
|
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ACD24_97_3
uncultured bacterium, Bacteria
|
Not on your lists |
730..1104
|
NifU family SUF system FeS assembly protein
SufE/NifU (db=superfamily db_id=SSF82649 from=1 to=122 evalue=1.6e-36)
no description (db=Gene3D db_id=G3DSA:3.90.1010.10 from=5 to=123 evalue=4.9e-30)
IRON-SULFUR CLUSTER ASSEMBLY ENZYME (NIFU HOMOLOG) (db=HMMPanther db_id=PTHR10093 from=3 to=122 evalue=1.8e-26 interpro_id=IPR002871 interpro_description=NIF system FeS cluster assembly, NifU, N-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
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ACD24_97_4
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
1124..1444
|
||
ACD24_97_5
uncultured bacterium, Bacteria
|
Not on your lists |
1441..1707
|
seg (db=Seg db_id=seg from=10 to=22)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=14 to=77 evalue=2.4e-12)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=14 to=87 evalue=5.5e-09)
|
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ACD24_97_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
1745..2032
|
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=1 to=84 evalue=9.4e-07 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=3 to=83 evalue=5.2e-06 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosome binding protein Y (YfiA homologue) 1..84 Tax=RBG_16_WWE3_37_10_curated
hypothetical protein
|
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ACD24_97_7
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
2013..2270
|
2013..2270 + (rbs_motif=None rbs_spacer=None)
Ribosome binding protein Y (YfiA homologue) 1..84 Tax=RBG_16_WWE3_37_10_curated
|
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ACD24_97_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
2291..2656
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
transmembrane_regions 9..31 Tax=RBG_16_WWE3_37_10_curated
|
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ACD24_97_9
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
comp(3037..3324)
|
seg (db=Seg db_id=seg from=49 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
seg 49..63 Tax=RBG_16_WWE3_37_10_curated
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ACD24_97_10
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
comp(3467..3676)
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DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=1 to=61 evalue=3.8e-11 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=2 to=53 evalue=2.4e-10 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=1 to=61 evalue=6.7e-09 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
xerD; Tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=RBG_16_WWE3_37_10_curated
|
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ACD24_97_11
uncultured bacterium, Bacteria
|
Not on your lists |
comp(3928..4338)
|
hypothetical protein
Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVQ6_9DELT (db=UNIREF evalue=5.0e-13 bit_score=76.6 identity=33.82 coverage=91.970802919708)
Phage_integrase (db=HMMPfam db_id=PF00589 from=10 to=120 evalue=4.7e-23 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=2 to=131 evalue=1.9e-22 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
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ACD24_97_12
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
comp(4340..4903)
|
hypothetical protein
seg (db=Seg db_id=seg from=119 to=128)
Phage_integr_N (db=HMMPfam db_id=PF02899 from=10 to=90 evalue=3.7e-14 interpro_id=IPR004107 interpro_description=Integrase, N-terminal SAM-like, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:1.10.150.130 from=8 to=100 evalue=5.4e-11)
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ACD24_97_13
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
5066..5464
|
seg (db=Seg db_id=seg from=12 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=32 to=67 evalue=NA)
DivIC (db=HMMPfam db_id=PF04977 from=16 to=91 evalue=9.4e-15 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
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ACD24_97_14
uncultured bacterium, Bacteria
|
Not on your lists |
comp(5614..6039)
|
5614..6039 - (rbs_motif=ATA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD96505.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD24_97_15
RBG_16_WWE3_37_10_curated, WWE3, Bacteria
|
Not on your lists |
comp(6044..6277)
|
6044..6277 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
|