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S4JAR1_27

Alias: S4JAR1_166

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
S4JAR1_27_1

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1..312
-----------------
DNA (312bp)
protein (104aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIR2_9EURY (db=UNIREF evalue=2.0e-09 bit_score=64.7 identity=32.26 coverage=87.5)
S4JAR1_27_2
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(809..970)
-----------------
DNA (162bp)
protein (54aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI35_9EURY (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=64.58 coverage=87.037037037037)
Ribosomal_L24e (db=HMMPfam db_id=PF01246 from=2 to=36 evalue=3.0e-07 interpro_id=IPR000988 interpro_description=Ribosomal protein L24e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=1 to=36 evalue=6.3e-06)
S4JAR1_27_3
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(980..1261)
-----------------
DNA (282bp)
protein (94aa)
Ribosomal protein S28e n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI36_9EURY (db=UNIREF evalue=3.0e-27 bit_score=124.0 identity=85.51 coverage=72.3404255319149)
30S ribosomal protein S28e
seg (db=Seg db_id=seg from=5 to=24)
RIBOSOMAL PROTEIN S28 (db=HMMPanther db_id=PTHR10769 from=24 to=91 evalue=1.7e-20 interpro_id=IPR000289 interpro_description=Ribosomal protein S28e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S4JAR1_27_4
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(1295..1834)
-----------------
DNA (540bp)
protein (180aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI37_9EURY (db=UNIREF evalue=1.0e-47 bit_score=191.0 identity=69.6 coverage=68.8888888888889)
50S ribosomal protein L7Ae
seg (db=Seg db_id=seg from=130 to=179)
RIBOSOMAL_L7AE (db=PatternScan db_id=PS01082 from=69 to=86 evalue=0.0 interpro_id=IPR004037 interpro_description=Ribosomal protein L7Ae conserved site GO=Cellular Component: ribonucleoprotein complex (GO:0030529), Biological Process: ribosome biogenesis (GO:0042254))
S4JAR1_27_5
unknown

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comp(1903..2238)
-----------------
DNA (336bp)
protein (112aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
seg (db=Seg db_id=seg from=61 to=74)
S4JAR1_27_6
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(2344..4536)
-----------------
DNA (2193bp)
protein (731aa)
Translation elongation factor aEF-2 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI38_9EURY (db=UNIREF evalue=0.0 bit_score=1238.0 identity=84.64 coverage=99.5896032831737)
fusA; elongation factor EF-2
fusA; elongation factor EF-2
seg (db=Seg db_id=seg from=168 to=179)
S4JAR1_27_7
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(4550..5266)
-----------------
DNA (717bp)
protein (239aa)
Ribosomal protein S7 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI39_9EURY (db=UNIREF evalue=1.0e-81 bit_score=305.0 identity=78.89 coverage=82.8451882845188)
small subunit ribosomal protein S7
seg (db=Seg db_id=seg from=6 to=38)
seg (db=Seg db_id=seg from=98 to=109)
S4JAR1_27_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(5263..5691)
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S12P n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI40_9EURY (db=UNIREF evalue=3.0e-54 bit_score=213.0 identity=92.96 coverage=98.6013986013986)
30S ribosomal protein S12P
seg (db=Seg db_id=seg from=9 to=35)
S23_S12_E_A: ribosomal protein S23 (S12) (db=HMMTigr db_id=TIGR00982 from=4 to=142 evalue=1.3e-60 interpro_id=IPR005680 interpro_description=Ribosomal protein S23, eukaryotic/archaeal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
S4JAR1_27_9

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comp(5706..6053)
-----------------
DNA (348bp)
protein (116aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI41_9EURY (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=60.0 coverage=81.0344827586207)
50S ribosomal protein L30e
RIBOSOMAL_L30E_2 (db=PatternScan db_id=PS00993 from=85 to=105 evalue=0.0 interpro_id=IPR000231 interpro_description=Ribosomal protein L30e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.30.1330.30 from=15 to=110 evalue=1.2e-21)
S4JAR1_27_10
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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6313..7764
-----------------
DNA (1452bp)
protein (484aa)
Geranylgeranyl reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI47_9EURY (db=UNIREF evalue=0.0 bit_score=698.0 identity=71.64 coverage=99.1735537190083)
digeranylgeranylglycerophospholipid reductase
digeranylgeranylglycerophospholipid reductase
seg (db=Seg db_id=seg from=12 to=26)
S4JAR1_27_11

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7775..7954
-----------------
DNA (180bp)
protein (60aa)
RNA polymerase Rpb6 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI46_9EURY (db=UNIREF evalue=9.0e-20 bit_score=99.0 identity=82.46 coverage=93.3333333333333)
DNA-directed RNA polymerase subunit K
RNA_POL_K_14KD (db=PatternScan db_id=PS01111 from=7 to=21 evalue=0.0 interpro_id=IPR020708 interpro_description=DNA-directed RNA polymerase, 14-18kDa subunit, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
RPB6/omega subunit-like (db=superfamily db_id=SSF63562 from=6 to=58 evalue=4.2e-15 interpro_id=IPR006110 interpro_description=RNA polymerase Rpb6 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
S4JAR1_27_12
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(7944..8735)
-----------------
DNA (792bp)
protein (264aa)
Metallophosphoesterase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI45_9EURY (db=UNIREF evalue=4.0e-56 bit_score=221.0 identity=42.39 coverage=91.6666666666667)
rpe; rpa-associated phosphoesterase (EC:3.1.-.-)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=20 to=162 evalue=1.4e-10)
Metallophos (db=HMMPfam db_id=PF00149 from=20 to=108 evalue=0.00021 interpro_id=IPR004843 interpro_description=Metallophosphoesterase GO=Molecular Function: hydrolase activity (GO:0016787))
S4JAR1_27_13
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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8845..9933
-----------------
DNA (1089bp)
protein (363aa)
Peptidase M50 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI44_9EURY (db=UNIREF evalue=2.0e-80 bit_score=303.0 identity=51.38 coverage=97.7961432506887)
sporulation protein IVFB-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
seg (db=Seg db_id=seg from=121 to=139)
S4JAR1_27_14
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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9959..13357
-----------------
DNA (3399bp)
protein (1133aa)
SMC domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI43_9EURY (db=UNIREF evalue=0.0 bit_score=639.0 identity=39.28 coverage=99.2056487202118)
chromosome segregation protein SMC
coiled-coil (db=Coil db_id=coil from=685 to=713 evalue=NA)
coiled-coil (db=Coil db_id=coil from=720 to=741 evalue=NA)
S4JAR1_27_15
unknown

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13362..13532
-----------------
DNA (171bp)
protein (57aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
S4JAR1_27_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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13529..14380
-----------------
DNA (852bp)
protein (284aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI42_9EURY (db=UNIREF evalue=2.0e-81 bit_score=305.0 identity=59.72 coverage=99.2957746478873)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=26 to=35)
PROTEASE FAMILY S26 MICROSOMAL SIGNAL PEPTIDASE SUBUNIT SPC18,21/SEC11(YEAST) (db=HMMPanther db_id=PTHR10806 from=209 to=268 evalue=2.0e-05 interpro_id=IPR001733 interpro_description=Peptidase S26B, eukaryotic signal peptidase GO=Biological Process: signal peptide processing (GO:0006465), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: membrane (GO:0016020))
S4JAR1_27_17
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(14516..15304)
-----------------
DNA (789bp)
protein (263aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI61_9EURY (db=UNIREF evalue=1.0e-71 bit_score=272.0 identity=52.29 coverage=95.4372623574145)
hypothetical protein
seg (db=Seg db_id=seg from=129 to=142)
coiled-coil (db=Coil db_id=coil from=214 to=242 evalue=NA)
S4JAR1_27_18
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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15531..15869
-----------------
DNA (339bp)
protein (113aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI60_9EURY (db=UNIREF evalue=4.0e-24 bit_score=113.0 identity=72.46 coverage=60.1769911504425)
hypothetical protein
seg (db=Seg db_id=seg from=70 to=112)
S4JAR1_27_19
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(15870..16283)
-----------------
DNA (414bp)
protein (138aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI59_9EURY (db=UNIREF evalue=9.0e-34 bit_score=145.0 identity=48.82 coverage=91.304347826087)
conserved exported protein of unknown function
DUF192 (db=HMMPfam db_id=PF02643 from=24 to=131 evalue=1.2e-26 interpro_id=IPR003795 interpro_description=Protein of unknown function DUF192)
S4JAR1_27_20

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comp(16287..17915)
-----------------
DNA (1629bp)
protein (543aa)
Aldehyde Dehydrogenase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI58_9EURY (db=UNIREF evalue=0.0 bit_score=695.0 identity=66.85 coverage=99.0791896869245)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88)
rocA; 1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88)
seg (db=Seg db_id=seg from=78 to=91)
S4JAR1_27_21
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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18092..19507
-----------------
DNA (1416bp)
protein (472aa)
FeS assembly protein SufB n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI57_9EURY (db=UNIREF evalue=0.0 bit_score=748.0 identity=79.06 coverage=98.9406779661017)
sufB; FeS cluster assembly protein SufB
sufB; FeS cluster assembly protein SufB
seg (db=Seg db_id=seg from=344 to=361)
S4JAR1_27_22
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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19517..20746
-----------------
DNA (1230bp)
protein (410aa)
SufBD protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI56_9EURY (db=UNIREF evalue=1.0e-48 bit_score=197.0 identity=32.2 coverage=96.8292682926829)
ABC-type transport system involved in Fe-S cluster assembly, permease component
seg (db=Seg db_id=seg from=160 to=171)
seg (db=Seg db_id=seg from=174 to=187)
S4JAR1_27_23
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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20736..21056
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI55_9EURY (db=UNIREF evalue=6.0e-19 bit_score=96.3 identity=45.0 coverage=91.588785046729)
HTH_3 (db=HMMPfam db_id=PF01381 from=30 to=57 evalue=1.6e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
S4JAR1_27_24
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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21066..21800
-----------------
DNA (735bp)
protein (245aa)
FeS assembly ATPase SufC n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI54_9EURY (db=UNIREF evalue=3.0e-89 bit_score=331.0 identity=66.12 coverage=98.3673469387755)
sufC; FeS assembly ATPase SufC
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
sufC: FeS assembly ATPase SufC (db=HMMTigr db_id=TIGR01978 from=3 to=242 evalue=5.1e-118 interpro_id=IPR010230 interpro_description=ATPase SufC, SUF system FeS cluster assembly GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
S4JAR1_27_25
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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21801..23039
-----------------
DNA (1239bp)
protein (413aa)
Cysteine desulfurase, SufS subfamily n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI53_9EURY (db=UNIREF evalue=6.0e-159 bit_score=564.0 identity=64.73 coverage=99.0314769975787)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7)
AA_TRANSFER_CLASS_5 (db=PatternScan db_id=PS00595 from=218 to=237 evalue=0.0 interpro_id=IPR020578 interpro_description=Aminotransferase class-V pyridoxal-phosphate binding site)
S4JAR1_27_26
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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23051..23455
-----------------
DNA (405bp)
protein (135aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI52_9EURY (db=UNIREF evalue=4.0e-43 bit_score=176.0 identity=64.52 coverage=91.1111111111111)
putative SUF system FeS assembly protein
SufE/NifU (db=superfamily db_id=SSF82649 from=1 to=126 evalue=1.8e-31)
no description (db=Gene3D db_id=G3DSA:3.90.1010.10 from=5 to=126 evalue=1.0e-27)
S4JAR1_27_27
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(23450..24169)
-----------------
DNA (720bp)
protein (240aa)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI51_9EURY (db=UNIREF evalue=5.0e-73 bit_score=277.0 identity=57.56 coverage=97.9166666666667)
metal-dependent hydrolase related to alanyl-tRNA synthetase
seg (db=Seg db_id=seg from=144 to=155)
ThrRS/AlaRS common domain (db=superfamily db_id=SSF55186 from=89 to=236 evalue=1.7e-28 interpro_id=IPR018163 interpro_description=Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO=Molecular Function: nucleotide binding (GO:0000166))
S4JAR1_27_28

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comp(24186..25052)
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI50_9EURY (db=UNIREF evalue=3.0e-61 bit_score=238.0 identity=48.6 coverage=98.2698961937716)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
seg (db=Seg db_id=seg from=250 to=263)
S4JAR1_27_29

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comp(25057..25656)
-----------------
DNA (600bp)
protein (200aa)
HAD superfamily hydrolase
HAD-like (db=superfamily db_id=SSF56784 from=3 to=193 evalue=8.1e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=66 to=182 evalue=3.4e-08)
HALOACID DEHALOGENASE-LIKE HYDROLASE (db=HMMPanther db_id=PTHR12725 from=96 to=183 evalue=1.1e-07)
S4JAR1_27_30
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(25785..27230)
-----------------
DNA (1446bp)
protein (482aa)
Prolyl-tRNA synthetase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI64_9EURY (db=UNIREF evalue=0.0 bit_score=655.0 identity=63.81 coverage=98.3402489626556)
Proline-tRNA ligase
Proline-tRNA ligase
TRNA SYNTHETASE-RELATED (db=HMMPanther db_id=PTHR11451 from=12 to=481 evalue=1.4e-206)
Displaying items 1-30 of 39 in total

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