name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_cont_500_p_scaffold_1173_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..1720
|
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KL75_9RHIZ
rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD87350.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizo
oppD; Oligopeptide-transport ATP-binding protein ABC transporter OppD
|
|
scnpilot_cont_500_p_scaffold_1173_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1877..2818
|
Monosaccharide-transporting ATPase n=1 Tax=Burkholderia sp. H160 RepID=B5WMI4_9BURK
branched-chain amino acid transport system / permease component family protein
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:AJZ58036.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
|
|
scnpilot_cont_500_p_scaffold_1173_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2857..3816
|
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C551_THENR
monosaccharide ABC transporter substrate-binding protein, CUT2 family; K10439 ribose transport system substrate-binding protein Tax=RBG_16_Betaproteobacteria_64_18_curated
periplasmic binding protein/LacI transcriptional regulator
|
|
scnpilot_cont_500_p_scaffold_1173_4
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
3823..5379
|
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716, ECO:0000256|SAAS:SAAS00041637};; TaxID=40318 species="Bacteria; Actinobacteria;
ABC transporter ATP-binding protein n=2 Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JXX2_STRHJ
ABC transporter ATP-binding protein
|
|
scnpilot_cont_500_p_scaffold_1173_5
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5376..6830
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037625D4
rbh
Oxidoreductase {ECO:0000313|EMBL:GAN98447.1}; TaxID=1234668 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xyl
hypothetical protein
|
|
scnpilot_cont_500_p_scaffold_1173_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria
|
Not on your lists |
6850..7749
|
carbon monoxide dehydrogenase, medium subunit; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
carbon-monoxide dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000378AB05
rbh
carbon monoxide dehydrogenase
|
|
scnpilot_cont_500_p_scaffold_1173_7
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria
|
Not on your lists |
7742..8233
|
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2] Tax=RBG_16_RIF_CHLX_70_13_curated
carbon monoxide dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI00036F3AE0
(2Fe-2S)-binding domain-containing protein
|
|
scnpilot_cont_500_p_scaffold_1173_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8230..8760
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000378CB93
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ADU51602.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter
|
|
scnpilot_cont_500_p_scaffold_1173_9
uncultured bacterium, Bacteria
|
Not on your lists |
8757..11177
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003819B11
rbh
Putative aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:ABZ79365.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
|
|
scnpilot_cont_500_p_scaffold_1173_10
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11247..12167
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037B35FF
LysR family transcriptional regulator
Scaffold8, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31705.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
|
|
scnpilot_cont_500_p_scaffold_1173_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12260..12790)
|
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
rbh
cupin region
Cupin region {ECO:0000313|EMBL:ABD07807.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris
|
|
scnpilot_cont_500_p_scaffold_1173_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13018..13668)
|
Transcriptional regulator, TetR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JFH3_OLICO
TetR family transcriptional regulator
Transcriptional regulator, TetR/AcrR family {ECO:0000313|EMBL:AEI05915.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="O
|
|
scnpilot_cont_500_p_scaffold_1173_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13923..15641
|
Fumarate reductase/succinate dehydrogenase flavoprotein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVH2_RHOP2
rbh
putative FAD-binding dehydrogenase
rbh
Fumarate reductase/succinate dehydrogenase flavoprotein {ECO:0000313|EMBL:ABD07788.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudom
|
|
scnpilot_cont_500_p_scaffold_1173_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria
|
Not on your lists |
15874..16845
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GC69_9BRAD
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
|
|
scnpilot_cont_500_p_scaffold_1173_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16930..17721
|
ABC transporter related n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8II64_METNO
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACL57933.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
|
|
scnpilot_cont_500_p_scaffold_1173_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17735..18532
|
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003805980
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKF39985.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
ABC transporter
|
|
scnpilot_cont_500_p_scaffold_1173_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18584..19438
|
carbon-monoxide dehydrogenase (EC:1.2.99.2)
rbh
Carbon-monoxide dehydrogenase {ECO:0000313|EMBL:ABD07792.1}; EC=1.2.99.2 {ECO:0000313|EMBL:ABD07792.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobia
Carbon-monoxide dehydrogenase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVG8_RHOP2
rbh
|
|
scnpilot_cont_500_p_scaffold_1173_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19489..19995
|
(2Fe-2S)-binding protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVG7_RHOP2
(2Fe-2S)-binding protein
(2Fe-2S)-binding protein {ECO:0000313|EMBL:ABD07793.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomona
|
|
scnpilot_cont_500_p_scaffold_1173_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19988..22132
|
carbon-monoxide dehydrogenase (EC:1.2.99.2)
rbh
Xanthine dehydrogenase, molybdenum binding subunit apoprotein {ECO:0000313|EMBL:ABD07794.1}; EC=1.17.1.4 {ECO:0000313|EMBL:ABD07794.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobact
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVG6_RHOP2
rbh
|
|
scnpilot_cont_500_p_scaffold_1173_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22331..23320)
|
Isochorismatase hydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y1_VARPS
rbh
isochorismatase hydrolase
rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ACS22612.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
|
|
scnpilot_cont_500_p_scaffold_1173_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23321..23515)
|
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT14_AFIFE
4-oxalocrotonate tautomerase family enzyme {ECO:0000313|EMBL:EKS29358.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
4-oxalocrotonate tautomerase family enzyme
|
|
scnpilot_cont_500_p_scaffold_1173_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23528..24184)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIF5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81100.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
scnpilot_cont_500_p_scaffold_1173_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24195..25541)
|
Amidohydrolase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y4_VARPS
rbh
amidohydrolase
rbh
Amidohydrolase {ECO:0000313|EMBL:ACS22615.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S1
|
|
scnpilot_cont_500_p_scaffold_1173_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25538..26428)
|
Shikimate/quinate 5-dehydrogenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y8_VARPS
rbh
Shikimate/quinate 5-dehydrogenase
rbh
Shikimate/quinate 5-dehydrogenase {ECO:0000313|EMBL:ACS22616.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax p
|
|
scnpilot_cont_500_p_scaffold_1173_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26425..27513)
|
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Y9_VARPS
rbh
NAD/NADP octopine/nopaline dehydrogenase
rbh
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:ACS22617.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovor
|
|
scnpilot_cont_500_p_scaffold_1173_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27521..28336)
|
ABC transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8W5_9RHIZ
rbh
ABC transporter {ECO:0000313|EMBL:EKF17470.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificu
ABC transporter
rbh
|
|
scnpilot_cont_500_p_scaffold_1173_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28419..29195)
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z1_VARPS
rbh
binding-protein-dependent transport systems inner membrane component
rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS22619.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
|
|
scnpilot_cont_500_p_scaffold_1173_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29238..30230)
|
NMT1/THI5 like domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z2_VARPS
rbh
NMT1/THI5 like domain protein
rbh
NMT1/THI5 like domain protein {ECO:0000313|EMBL:ACS22620.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
|
|
scnpilot_cont_500_p_scaffold_1173_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30509..31171
|
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z3_VARPS
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACS22621.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
|
|
scnpilot_cont_500_p_scaffold_1173_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31211..31678
|
Endoribonuclease L-PSP n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D0Z4_VARPS
Endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACS22622.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (s
|