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scnpilot_cont_500_p_scaffold_273_23

Organism: SCNpilot_cont_500_p_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 26 / 38 MC: 22
Location: 24308..24619

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway, VirB3-like family protein n=1 Tax=Pseudomonas putida S610 RepID=V6JCB2_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 150
  • Evalue 7.90e-34
Type IV secretory pathway, VirB3-like family protein {ECO:0000313|EMBL:EST17450.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 150
  • Evalue 1.10e-33
trbD; conjugal transfer protein TrbD similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 103.0
  • Bit_score: 147
  • Evalue 1.90e-33

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGAGCTGCATAGGGTCCCGATACGGCGCATCGGCAACCGCTCCAATCTTTTCATGGGGGGCGACAGGGAACTGGTGATGCTGGCGGGCCTCATTGCCTTCTCCCTGGTGTTCAATGCCCAGGAATGGCGCGCCGCAATCATCGGCACGGGGTTGTGGGTCGCGGCCCTGTTCCTGCTGCGCTTGATGGCCAAGTCCGATCCGTTGATGCGACCGGTATACCTGCGCCACCGGCGCTACAAGGCCTATTACCCGCCGCGCGCCACGCCCTTCAGGAACAACGGGCGCATCCAGGAGCGGCAATACCGATGA
PROTEIN sequence
Length: 104
MELHRVPIRRIGNRSNLFMGGDRELVMLAGLIAFSLVFNAQEWRAAIIGTGLWVAALFLLRLMAKSDPLMRPVYLRHRRYKAYYPPRATPFRNNGRIQERQYR*