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SCNpilot_cont_500_p_UNK

In projects: SCNPILOT_CONT_500_P

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 4.00 Longest contig: 87.34 Kbp Bin length: 156.24 Mbp GC content: 54.75 %
Contigs count: 81380 Features count: 213834 rRNAs count: 0 tRNAs count: 0

Genome completeness

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 26 / 38 MC: 22
Displaying items 81151-81200 of 81380 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_cont_500_p_scaffold_43912
Species: Chaetomium globosum (50%)
2 1644 bp 50.73 7.94 104.20
scnpilot_cont_500_p_scaffold_76836 2 1143 bp 65.88 1.84 104.20
scnpilot_cont_500_p_scaffold_84701
Species: Meyerozyma guilliermondii (50%)
2 1071 bp 56.02 1.40 104.20
scnpilot_cont_500_p_scaffold_62765 4 1307 bp 51.80 1.15 104.21
scnpilot_cont_500_p_scaffold_51005 3 1494 bp 60.51 1.71 104.22
scnpilot_cont_500_p_scaffold_48599 4 1540 bp 62.86 3.12 104.22
scnpilot_cont_500_p_scaffold_54119
Species: Bosea sp. LC85 (100%)
2 1439 bp 70.74 2.29 104.24
scnpilot_cont_500_p_scaffold_33401 3 1954 bp 63.31 1.07 104.25
scnpilot_cont_500_p_scaffold_76629 3 1145 bp 46.64 2.75 104.28
scnpilot_cont_500_p_scaffold_34475
Order: Rhizobiales (66.67%)
3 1916 bp 67.28 2.58 104.28
scnpilot_cont_500_p_scaffold_48503
Species: Babesia bigemina (50%)
2 1542 bp 62.06 7.30 104.28
scnpilot_cont_500_p_scaffold_68796 2 1231 bp 49.23 2.19 104.31
scnpilot_cont_500_p_scaffold_85216
Species: Algoriphagus machipongonensis (50%)
2 1067 bp 37.77 4.36 104.31
scnpilot_cont_500_p_scaffold_32662
Genus: Legionella (66.67%)
3 1981 bp 38.72 2.95 104.34
scnpilot_cont_500_p_scaffold_66208
Species: Acanthamoeba castellanii (50%)
2 1262 bp 63.39 8.08 104.36
scnpilot_cont_500_p_scaffold_86684 2 1055 bp 58.29 5.83 104.36
scnpilot_cont_500_p_scaffold_74561
Class: Alphaproteobacteria (66.67%)
3 1167 bp 61.53 3.73 104.37
scnpilot_cont_500_p_scaffold_57355
Species: Microbacterium sp. TS-1 (66.67%)
3 1802 bp 71.37 3.25 104.38
scnpilot_cont_500_p_scaffold_79779 2 1115 bp 57.22 6.73 104.40
scnpilot_cont_500_p_scaffold_75346
Species: Schizosaccharomyces japonicus (50%)
2 1158 bp 60.71 8.94 104.40
scnpilot_cont_500_p_scaffold_59017
Species: Fusarium oxysporum (50%)
2 1359 bp 59.97 1.55 104.41
scnpilot_cont_500_p_scaffold_45732 3 1603 bp 58.89 2.34 104.43
scnpilot_cont_500_p_scaffold_91720
Species: Opitutus terrae (50%)
2 1014 bp 57.59 1.48 104.44
scnpilot_cont_500_p_scaffold_64911
Species: Salpingoeca rosetta (50%)
2 1278 bp 52.03 2.58 104.46
scnpilot_cont_500_p_scaffold_89975
Species: Homo sapiens (50%)
2 1028 bp 61.48 2.04 104.48
scnpilot_cont_500_p_scaffold_71209 2 1203 bp 57.77 2.00 104.49
scnpilot_cont_500_p_scaffold_82424 3 1091 bp 61.50 2.75 104.49
scnpilot_cont_500_p_scaffold_62372
Species: Caenorhabditis brenneri (50%)
2 1312 bp 53.89 3.43 104.50
scnpilot_cont_500_p_scaffold_78125 4 1131 bp 47.75 3.45 104.51
scnpilot_cont_500_p_scaffold_20477
Class: Alphaproteobacteria (66.67%)
3 2632 bp 67.82 2.74 104.52
scnpilot_cont_500_p_scaffold_74167 2 1171 bp 62.25 2.31 104.53
scnpilot_cont_500_p_scaffold_47578 5 1561 bp 65.73 2.31 104.55
scnpilot_cont_500_p_scaffold_86869
Species: Rhodobacteraceae bacterium HIMB11 (50%)
2 1053 bp 63.15 1.71 104.56
scnpilot_cont_500_p_scaffold_75266 2 1159 bp 58.33 4.27 104.57
scnpilot_cont_500_p_scaffold_79944 2 1113 bp 61.28 5.12 104.58
scnpilot_cont_500_p_scaffold_63589
Species: Arcticibacter svalbardensis (50%)
2 1296 bp 53.63 1.00 104.63
scnpilot_cont_500_p_scaffold_86709
Species: Mesorhizobium sp. L2C085B000 (50%)
2 1055 bp 62.37 1.99 104.65
scnpilot_cont_500_p_scaffold_49948
Species: Pseudomonas bauzanensis (60%)
5 1513 bp 67.55 2.38 104.69
scnpilot_cont_500_p_scaffold_70668
Species: Comamonas testosteroni (50%)
2 1209 bp 56.24 1.49 104.72
scnpilot_cont_500_p_scaffold_33090
Species: Thalassospira profundimaris (50%)
2 1965 bp 62.39 2.52 104.73
scnpilot_cont_500_p_scaffold_65463
Species: Hyphomicrobium denitrificans (66.67%)
3 1810 bp 63.70 2.49 104.75
scnpilot_cont_500_p_scaffold_90776 2 1022 bp 51.86 1.17 104.79
scnpilot_cont_500_p_scaffold_74441 2 1168 bp 58.90 6.55 104.79
scnpilot_cont_500_p_scaffold_61177 3 1328 bp 57.15 7.23 104.82
scnpilot_cont_500_p_scaffold_34846 3 1903 bp 57.91 3.07 104.83
scnpilot_cont_500_p_scaffold_25740 3 2292 bp 59.82 7.33 104.84
scnpilot_cont_500_p_scaffold_75543
Species: Rhizobium sp. YS-1r (50%)
2 1156 bp 64.79 3.37 104.84
scnpilot_cont_500_p_scaffold_88026
Species: Rhizobium sp. CF142 (100%)
2 1044 bp 63.98 2.30 104.89
scnpilot_cont_500_p_scaffold_32588
Species: Amphimedon queenslandica (50%)
2 1985 bp 44.03 5.59 104.89
scnpilot_cont_500_p_scaffold_84941
Species: Devosia chinhatensis (50%)
2 1069 bp 66.32 1.12 104.96
Displaying items 81151-81200 of 81380 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.