ggKbase home page

SCNpilot_cont_500_p_UNK

In projects: SCNPILOT_CONT_500_P
Displaying items 851-900 of 81380 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
scnpilot_cont_500_p_scaffold_58797
Species: Variovorax paradoxus (50%)
2 1363 bp 66.98 1.54 101.03
scnpilot_cont_500_p_scaffold_52656 4 1464 bp 52.87 8.40 101.03
scnpilot_cont_500_p_scaffold_26431
Class: Actinobacteria (50%)
4 2254 bp 53.64 2.66 101.02
scnpilot_cont_500_p_scaffold_65245
Domain: Fungi (100%)
3 1274 bp 58.08 6.12 101.02
scnpilot_cont_500_p_scaffold_22847 2 2462 bp 63.00 7.43 101.02
scnpilot_cont_500_p_scaffold_83184
Species: Rhodospirillum centenum (66.67%)
3 1084 bp 68.91 1.38 101.02
scnpilot_cont_500_p_scaffold_72586
Species: Alicycliphilus sp. B1 (50%)
2 1188 bp 69.87 2.02 101.01
scnpilot_cont_500_p_scaffold_57208
Species: Azospirillum thiophilum (50%)
2 1387 bp 65.68 1.30 101.01
scnpilot_cont_500_p_scaffold_72334
Species: Streptomyces bottropensis (50%)
2 1191 bp 74.48 2.64 101.01
scnpilot_cont_500_p_scaffold_57024 5 1390 bp 58.35 5.94 101.01
scnpilot_cont_500_p_scaffold_16905 9 2982 bp 72.33 4.98 101.01
scnpilot_cont_500_p_scaffold_22222
Species: Kyrpidia tusciae (100%)
2 3422 bp 61.69 3.46 100.99
scnpilot_cont_500_p_scaffold_70383 3 1212 bp 54.79 6.81 100.99
scnpilot_cont_500_p_scaffold_70392
Species: Herbaspirillum sp. CF444 (50%)
2 1212 bp 68.56 1.73 100.99
scnpilot_cont_500_p_scaffold_62287
Species: Adineta vaga (50%)
2 1313 bp 29.93 47.07 100.99
scnpilot_cont_500_p_scaffold_37413 2 1821 bp 54.97 4.78 100.99
scnpilot_cont_500_p_scaffold_55375 3 1417 bp 51.45 2.75 100.99
scnpilot_cont_500_p_scaffold_61641
Species: Coprinopsis cinerea (50%)
2 1322 bp 58.17 8.62 100.98
scnpilot_cont_500_p_scaffold_54865
Species: Acidimicrobium ferrooxidans (50%)
2 1426 bp 76.93 3.05 100.98
scnpilot_cont_500_p_scaffold_54659
Species: Acinetobacter baumannii (100%)
2 1429 bp 33.66 2.31 100.98
scnpilot_cont_500_p_scaffold_48773
Species: Microbacterium sp. SUBG005 (50%)
4 1536 bp 69.79 2.15 100.98
scnpilot_cont_500_p_scaffold_68862
Species: Martelella endophytica (100%)
2 1230 bp 68.54 2.44 100.98
scnpilot_cont_500_p_scaffold_54356
Species: Devosia psychrophila (50%)
2 1435 bp 67.74 2.20 100.98
scnpilot_cont_500_p_scaffold_18901
Species: Microbacterium mangrovi (100%)
4 2772 bp 69.81 3.90 100.97
scnpilot_cont_500_p_scaffold_89929
Species: Acanthamoeba castellanii (100%)
3 1028 bp 46.30 3.65 100.97
scnpilot_cont_500_p_scaffold_30496
Species: Phytophthora ramorum (50%)
2 2065 bp 50.41 3.12 100.97
scnpilot_cont_500_p_scaffold_36010
Species: Lepisosteus oculatus (50%)
2 1866 bp 54.72 11.90 100.96
scnpilot_cont_500_p_scaffold_88772 4 1037 bp 54.29 3.76 100.96
scnpilot_cont_500_p_scaffold_88811
Species: Arthrobacter arilaitensis (50%)
2 1037 bp 53.04 2.31 100.96
scnpilot_cont_500_p_scaffold_67365
Species: Microbacterium testaceum (50%)
2 1248 bp 65.87 2.40 100.96
scnpilot_cont_500_p_scaffold_52797 3 1462 bp 48.56 3.39 100.96
scnpilot_cont_500_p_scaffold_66860
Species: CG_TM7_01 (50%)
2 1254 bp 47.29 1.79 100.96
scnpilot_cont_500_p_scaffold_47094
Species: Plasmodium knowlesi (50%)
2 1572 bp 29.39 1.91 100.95
scnpilot_cont_500_p_scaffold_16415
Species: Capsaspora owczarzaki (50%)
2 3040 bp 64.77 2.07 100.95
scnpilot_cont_500_p_scaffold_87380
Species: Candidatus Microthrix parvicella (50%)
2 1049 bp 61.11 3.15 100.95
scnpilot_cont_500_p_scaffold_65861
Species: Sphingobacterium sp. PM2-P1-29 (100%)
2 1266 bp 42.65 2.13 100.95
scnpilot_cont_500_p_scaffold_65578
Order: Rhizobiales (66.67%)
3 1269 bp 65.48 2.25 100.95
scnpilot_cont_500_p_scaffold_57660
Species: Mesorhizobium plurifarium (100%)
3 1379 bp 69.40 1.63 100.94
scnpilot_cont_500_p_scaffold_92979
Species: Burkholderia pseudomallei (50%)
2 1911 bp 69.70 3.14 100.94
scnpilot_cont_500_p_scaffold_46132 3 1593 bp 23.41 1.41 100.94
scnpilot_cont_500_p_scaffold_80924
Species: bacterium YEK0313 (66.67%)
3 1382 bp 68.52 2.50 100.94
scnpilot_cont_500_p_scaffold_18459
Species: R_Alphaproteobacteria_66_14 (100%)
5 3201 bp 69.79 2.91 100.94
scnpilot_cont_500_p_scaffold_24720 3 2348 bp 63.25 6.20 100.94
scnpilot_cont_500_p_scaffold_73889 3 1174 bp 58.35 7.79 100.94
scnpilot_cont_500_p_scaffold_84777 2 1070 bp 65.23 1.68 100.94
scnpilot_cont_500_p_scaffold_64474
Species: Parvibaculum lavamentivorans (100%)
2 1284 bp 61.76 2.69 100.94
scnpilot_cont_500_p_scaffold_33512
Species: Microbacterium sp. C448 (100%)
2 1950 bp 74.77 3.08 100.92
scnpilot_cont_500_p_scaffold_44725 4 1626 bp 59.35 7.38 100.92
scnpilot_cont_500_p_scaffold_83116
Species: Sphingobacterium spiritivorum (50%)
4 1085 bp 40.46 1.66 100.92
scnpilot_cont_500_p_scaffold_83135
Species: Rhodanobacter fulvus (100%)
2 1085 bp 71.80 2.21 100.92
Displaying items 851-900 of 81380 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.