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scnpilot_cont_500_p_scaffold_8

Search features with annotation key words

Displaying items 91-120 of 586 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_8_91
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118764..120344)
DNA (1581bp) protein (527aa)
MFS transporter n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380154E rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EZP54367.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
major facilitator transporter
scnpilot_cont_500_p_scaffold_8_92
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120435..120695)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002DDF9D3
Uncharacterized protein {ECO:0000313|EMBL:CCW19047.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
scnpilot_cont_500_p_scaffold_8_93
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120741..121247)
DNA (507bp) protein (169aa)
Transcriptional regulator, AsnC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAS8_NOVAD
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABD25045.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_8_94
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121356..122459
DNA (1104bp) protein (368aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ABD25044.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ABD25044.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAS9_NOVAD rbh
scnpilot_cont_500_p_scaffold_8_95
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122456..123019
DNA (564bp) protein (188aa)
glyoxalase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B66DA1 rbh
Glyoxalase family protein {ECO:0000313|EMBL:GAO54193.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
glyoxalase-family protein
scnpilot_cont_500_p_scaffold_8_96
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123016..124308
DNA (1293bp) protein (431aa)
Fumarylacetoacetase {ECO:0000313|EMBL:GAO54194.1}; EC=3.7.1.2 {ECO:0000313|EMBL:GAO54194.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
fumarylacetoacetase (EC:3.7.1.2)
fumarylacetoacetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5756D rbh
scnpilot_cont_500_p_scaffold_8_97
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124426..127248
DNA (2823bp) protein (941aa)
Membrane protein, putative n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5H7_NOVAD rbh
Membrane protein, putative {ECO:0000313|EMBL:ABD26896.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
hypothetical protein
scnpilot_cont_500_p_scaffold_8_98
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127245..128579
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5H8_NOVAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26895.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_8_99
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128712..129650)
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776, ECO:0000313|EMBL:AJP73845.1}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteob
2-dehydropantoate 2-reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV8_9SPHN
2-dehydropantoate 2-reductase
scnpilot_cont_500_p_scaffold_8_100
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129661..130146)
DNA (486bp) protein (162aa)
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q2_NOVAD
aromatic-ring-hydroxylating dioxygenase
Aromatic-ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AJP73846.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source
scnpilot_cont_500_p_scaffold_8_101
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130143..131507)
DNA (1365bp) protein (455aa)
Ring hydroxylating dioxygenase, alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q3_NOVAD rbh
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AJP73847.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
scnpilot_cont_500_p_scaffold_8_102
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131507..133072)
DNA (1566bp) protein (522aa)
benzoylformate decarboxylase (EC:4.1.1.7)
Benzoylformate decarboxylase {ECO:0000313|EMBL:AJP73848.1}; EC=4.1.1.7 {ECO:0000313|EMBL:AJP73848.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
Thiamine pyrophosphate enzyme-like TPP-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q4_NOVAD rbh
scnpilot_cont_500_p_scaffold_8_103
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133177..134094
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q5_NOVAD
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD26118.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_8_104
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134115..135284)
DNA (1170bp) protein (390aa)
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL08_9SPHN rbh
major facilitator superfamily transporter
Major facilitator transporter {ECO:0000313|EMBL:CCA92110.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_cont_500_p_scaffold_8_105
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135308..135697)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL09_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92111.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_8_106
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135690..136589)
DNA (900bp) protein (300aa)
Xylose isomerase-like TIM barrel n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL10_9SPHN rbh
xylose isomerase-like TIM barrel domain-containing protein
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:CCA92112.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
scnpilot_cont_500_p_scaffold_8_107
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136586..137815)
DNA (1230bp) protein (410aa)
salicylate hydroxylase (EC:1.14.13.1)
Salicylate hydroxylase {ECO:0000313|EMBL:CCA92113.1}; EC=1.14.13.1 {ECO:0000313|EMBL:CCA92113.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
Salicylate hydroxylase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL11_9SPHN rbh
scnpilot_cont_500_p_scaffold_8_108
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137968..138573
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IL12_9SPHN
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:CCA92114.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_8_109
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138652..140295)
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031D0D64 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP83225.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK
hypothetical protein
scnpilot_cont_500_p_scaffold_8_110
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140452..141639
DNA (1188bp) protein (396aa)
Transcriptional regulator, TetR family n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZT4_CAUCE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ENZ81966.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Ca
scnpilot_cont_500_p_scaffold_8_111
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141649..143004
DNA (1356bp) protein (452aa)
SpsF n=1 Tax=Sphingomonas sanxanigenens RepID=U6BRK6_9SPHN
SpsF {ECO:0000313|EMBL:AHA38088.1}; TaxID=397260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens.;"
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_8_112
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143077..145467
DNA (2391bp) protein (797aa)
Outer membrane receptor protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WTV6_9SPHN rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EJK85620.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_8_113
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145482..146756
DNA (1275bp) protein (425aa)
acid phosphatase (EC:3.1.3.2)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD85_9CAUL rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDX82223.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevund
scnpilot_cont_500_p_scaffold_8_114
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146788..147546
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A4811
Scaffold47, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29867.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
scnpilot_cont_500_p_scaffold_8_115
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147626..148222)
DNA (597bp) protein (199aa)
Efflux protein, LysE family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRT4_9RHOB
Efflux protein, LysE family protein {ECO:0000313|EMBL:BAQ71506.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
Cysteine/O-acetylserine efflux protein
scnpilot_cont_500_p_scaffold_8_116
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148344..149150)
DNA (807bp) protein (269aa)
Transcriptional regulator, AraC family n=1 Tax=Citreicella sp. SE45 RepID=D0D5Q4_9RHOB rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEX15657.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Cit
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_117
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149330..151531
DNA (2202bp) protein (734aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCN5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57628.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_8_118
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151501..152250
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1T3_SPHCR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG51499.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlo
scnpilot_cont_500_p_scaffold_8_119
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152338..153297)
DNA (960bp) protein (320aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B68A08 rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK80968.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_120
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153402..155672
DNA (2271bp) protein (757aa)
Outer membrane receptor protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DDW4_9SPHN rbh
Outer membrane receptor protein {ECO:0000313|EMBL:EJK80967.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
TonB-dependent receptor
Displaying items 91-120 of 586 in total

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