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scnpilot_cont_500_p_scaffold_8

Search features with annotation key words

Displaying items 151-180 of 586 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_8_151
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196111..199062
DNA (2952bp) protein (984aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D9ABA rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ88927.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp.
TonB-dependent receptor-like protein
scnpilot_cont_500_p_scaffold_8_152
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

199167..200765
DNA (1599bp) protein (533aa)
carboxylesterase type B (EC:3.1.1.1)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;
Carboxylesterase type B n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDL3_9SPHN rbh
scnpilot_cont_500_p_scaffold_8_153
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

200776..202347
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDL2_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90387.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_8_154
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202397..203581)
DNA (1185bp) protein (395aa)
Transporter, major facilitator family n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7G3_9SPHN rbh
Transporter, major facilitator family {ECO:0000313|EMBL:EGD59475.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
major facilitator superfamily protein
scnpilot_cont_500_p_scaffold_8_155
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203578..204714)
DNA (1137bp) protein (379aa)
N-ethylmaleimide reductase (EC:1.-.-.-)
Glycerol trinitrate reductase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G2_9SPHN rbh
Glycerol trinitrate reductase {ECO:0000313|EMBL:EGD59474.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_cont_500_p_scaffold_8_156
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204843..205850)
DNA (1008bp) protein (336aa)
Putative transcription regulator protein, LysR n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBZ8_9SPHN rbh
Putative transcription regulator protein, LysR {ECO:0000313|EMBL:EGD57865.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.
transcription regulator protein
scnpilot_cont_500_p_scaffold_8_157
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205869..207014)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036D60B1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL27197.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
scnpilot_cont_500_p_scaffold_8_158
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207112..209409)
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000377377C rbh
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
ferrichrome-iron receptor
scnpilot_cont_500_p_scaffold_8_159
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209624..210982)
DNA (1359bp) protein (453aa)
Malate-sodium symport n=3 Tax=Burkholderia cenocepacia RepID=G7H8G1_9BURK
cimH; citrate/malate transporter
Citrate/malate transporter {ECO:0000313|EMBL:AJY10173.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comp
scnpilot_cont_500_p_scaffold_8_160
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211128..212528)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
Tricarboxylate transport sensor protein TctE n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QRG1_9DELT rbh
two-component sensor histidine kinase
scnpilot_cont_500_p_scaffold_8_161
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212525..213193)
DNA (669bp) protein (223aa)
transcriptional regulator n=1 Tax=Alphaproteobacteria RepID=UPI000262C319
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26023.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
DNA-binding two-component response regulator
scnpilot_cont_500_p_scaffold_8_162
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213283..214404
DNA (1122bp) protein (374aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PN21_9DELT rbh
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26022.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_8_163
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214420..215199)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B411B9
Uncharacterized protein {ECO:0000313|EMBL:GAO54295.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_8_164
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215355..216134)
DNA (780bp) protein (260aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
Hydroxypyruvate isomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XES4_NOVAD rbh
xylose isomerase domain-containing protein
scnpilot_cont_500_p_scaffold_8_165
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216642..217496
DNA (855bp) protein (285aa)
fumarylacetoacetate (FAA) hydrolase (EC:5.3.3.10)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXP3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16848.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_8_166
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217502..218236
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J4I2_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16849.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
oxidoreductase
scnpilot_cont_500_p_scaffold_8_167
unknown

Not on your lists

218233..218397
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_168
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218422..219039)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA99_NOVAD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABD25224.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_8_169
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219207..220424
DNA (1218bp) protein (406aa)
Oxidoreductase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAA1_NOVAD rbh
oxidoreductase-like protein
Oxidoreductase-like protein {ECO:0000313|EMBL:ABD25222.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
scnpilot_cont_500_p_scaffold_8_170
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220458..221441
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAA2_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS44947.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
scnpilot_cont_500_p_scaffold_8_171
unknown

Not on your lists

comp(221514..221687)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_172
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221965..222756
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V448_SPHWW rbh
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABQ67064.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
scnpilot_cont_500_p_scaffold_8_173
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222761..223663
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V447_SPHWW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ67063.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wi
scnpilot_cont_500_p_scaffold_8_174
unknown

Not on your lists

223771..223908
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_175
unknown

Not on your lists

223951..224169
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_8_176
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224441..224713
DNA (273bp) protein (91aa)
UPI0003CFA5E3 related cluster n=1 Tax=unknown RepID=UPI0003CFA5E3
Protein usg {ECO:0000313|EMBL:ESZ88962.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;
Usg family protein
scnpilot_cont_500_p_scaffold_8_177
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224768..225595
DNA (828bp) protein (276aa)
DegP2 peptidase, Serine peptidase, MEROPS family S01B n=2 Tax=Marinobacter RepID=A1U639_MARAV
peptidase S1 and S6, chymotrypsin/Hap
DegP2 peptidase, Serine peptidase, MEROPS family S01B {ECO:0000313|EMBL:ABM20458.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacte
scnpilot_cont_500_p_scaffold_8_178
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225576..226451)
DNA (876bp) protein (292aa)
ydbC2; putative oxidoreductase YdbC (EC:1.-.-.-)
Putative oxidoreductase YdbC {ECO:0000313|EMBL:AHK72338.1}; EC=1.-.-.- {ECO:0000313|EMBL:AHK72338.1};; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobact
Putative oxidoreductase n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FNE4_GLUOX rbh
scnpilot_cont_500_p_scaffold_8_179
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226546..227460
DNA (915bp) protein (305aa)
Putative HTH-type transcriptional regulator ycaN n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S371_9PROT rbh
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EZP71831.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
ycaN; HTH-type transcriptional regulator YcaN
scnpilot_cont_500_p_scaffold_8_180
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227488..228447)
DNA (960bp) protein (320aa)
ABC-type (Unclassified) transport system, ATPase component n=1 Tax=Sphingobium sp. AP49 RepID=J2DK74_9SPHN
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:EJK83322.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
Putative ABC transporter ATP-binding protein
Displaying items 151-180 of 586 in total

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