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scnpilot_cont_500_p_scaffold_8

Search features with annotation key words

Displaying items 181-210 of 586 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_8_181
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228416..230968)
DNA (2553bp) protein (851aa)
ATPase n=1 Tax=Sphingobium baderi LL03 RepID=T0HX54_9SPHN rbh
ATPase {ECO:0000313|EMBL:KEQ52889.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
putative ATPase
scnpilot_cont_500_p_scaffold_8_182
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231062..232939)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WXI6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJK87015.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_8_183
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233125..233997)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00031CFAAA rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EZP71745.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_184
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234021..234638)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036F38F7 rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67468.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_cont_500_p_scaffold_8_185
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234667..236784)
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036B106B rbh
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AJP74355.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp.
scnpilot_cont_500_p_scaffold_8_186
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236965..238212
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FC5A15 rbh
4-hydroxybenzoate transporter PcaK {ECO:0000313|EMBL:AKH43955.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sour
putative aromatic acid transporter
scnpilot_cont_500_p_scaffold_8_187
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238188..238619)
DNA (432bp) protein (144aa)
MarR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE08_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:CCA90533.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_8_188
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238766..240184
DNA (1419bp) protein (473aa)
Aldehyde dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE39_9SPHN rbh
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:CCA90564.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_cont_500_p_scaffold_8_189
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(240195..241088)
DNA (894bp) protein (298aa)
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH8_9SPHN
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:BAK68352.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
scnpilot_cont_500_p_scaffold_8_190
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

241219..243513
DNA (2295bp) protein (765aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036CAAD7 rbh
Arylsulfatase {ECO:0000313|EMBL:KFF02905.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.
arylsulfatase A family protein
scnpilot_cont_500_p_scaffold_8_191
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243612..245081)
DNA (1470bp) protein (490aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:CCW16381.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CCW16381.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Aldehyde dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHD2_9SPHN rbh
aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_8_192
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245111..246721)
DNA (1611bp) protein (537aa)
Choline dehydrogenase {ECO:0000313|EMBL:CCW18825.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CCW18825.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
Choline dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNM1_9SPHN rbh
glucose-methanol-choline oxidoreductase
scnpilot_cont_500_p_scaffold_8_193
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246849..247379)
DNA (531bp) protein (177aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MXU7_9SPHN
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CCW20332.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="
MarR family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_194
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

247474..247989
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000309845D
SnoaL-like domain protein {ECO:0000313|EMBL:AKH43952.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alter
hypothetical protein
scnpilot_cont_500_p_scaffold_8_195
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248001..249611)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E386DB rbh
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABZ72372.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Ca
scnpilot_cont_500_p_scaffold_8_196
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(249611..250063)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030993D2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37611.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
scnpilot_cont_500_p_scaffold_8_197
unknown

Not on your lists

comp(250074..250502)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030B6F63
scnpilot_cont_500_p_scaffold_8_198
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250518..251984)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036A4D8C rbh
Aldehyde dehydrogenase (NAD+) {ECO:0000313|EMBL:EBA07797.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stel
betaine-aldehyde dehydrogenase
scnpilot_cont_500_p_scaffold_8_199
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252222..253160
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F62A46 rbh
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AIO65291.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;
scnpilot_cont_500_p_scaffold_8_200
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253194..254498
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003814D90 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK16926.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;
major facilitator family transporter
scnpilot_cont_500_p_scaffold_8_201
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254685..257045
DNA (2361bp) protein (787aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKN7_9SPHN
Colicin I receptor {ECO:0000313|EMBL:AKH42954.1}; Flags: Precursor;; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" s
TonB-dependent receptor-like protein
scnpilot_cont_500_p_scaffold_8_202
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257301..259421
DNA (2121bp) protein (707aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
aguA; alpha-glucuronidase (EC:3.2.1.139)
Alpha-glucuronidase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAJ5_9SPHN rbh
scnpilot_cont_500_p_scaffold_8_203
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259554..262505)
DNA (2952bp) protein (984aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031D8D36 rbh
TonB-denpendent receptor {ECO:0000313|EMBL:AHE53233.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_8_204
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262809..264071
DNA (1263bp) protein (421aa)
hexuronate transporter ExuT n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00036FAE14 rbh
Hexuronate transporter ExuT {ECO:0000313|EMBL:AHE53232.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomon
exuT; hexuronate transporter
scnpilot_cont_500_p_scaffold_8_205
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264068..265732
DNA (1665bp) protein (555aa)
xynB; xylan 1,4-beta-xylosidase (EC:3.2.1.37)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F20FB5 rbh
Beta-xylosidase {ECO:0000313|EMBL:ETI63562.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
scnpilot_cont_500_p_scaffold_8_206
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265687..266733)
DNA (1047bp) protein (349aa)
LacI family transcription regulator n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI000304A126 rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:AJR23959.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
LacI family transcriptional regulator
scnpilot_cont_500_p_scaffold_8_207
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266815..269328)
DNA (2514bp) protein (838aa)
UPI0003D699C8 related cluster n=1 Tax=unknown RepID=UPI0003D699C8 rbh
Glycoside hydrolase {ECO:0000313|EMBL:ETI63567.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C10
glycoside hydrolase family 9
scnpilot_cont_500_p_scaffold_8_208
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

269496..270602
DNA (1107bp) protein (369aa)
Putative beta-xylosidase {ECO:0000313|EMBL:KHS44473.1}; EC=3.2.1.37 {ECO:0000313|EMBL:KHS44473.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
alpha-N-arabinofuranosidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD516 rbh
alpha-N-arabinofuranosidase
scnpilot_cont_500_p_scaffold_8_209
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270607..272058
DNA (1452bp) protein (484aa)
Xylulose kinase {ECO:0000313|EMBL:GAO53048.1}; EC=2.7.1.17 {ECO:0000313|EMBL:GAO53048.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
xylulokinase (EC:2.7.1.17)
xylulokinase n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002EAF33D rbh
scnpilot_cont_500_p_scaffold_8_210
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272058..273365
DNA (1308bp) protein (436aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1630648 species="Bacteria; Proteo
xylose isomerase (EC:5.3.1.5)
UPI0003CFD755 related cluster n=1 Tax=unknown RepID=UPI0003CFD755 rbh
Displaying items 181-210 of 586 in total

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