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scnpilot_cont_500_p_scaffold_62

Search features with annotation key words

Displaying items 31-60 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_62_31
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34634..35383)
DNA (750bp) protein (250aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC43_9SPHN rbh
flagellar motor protein MotA
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:EHJ61142.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_62_32
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35478..36134)
DNA (657bp) protein (219aa)
Outer membrane transport energization protein TonB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCE4_NOVAD
TonB-like protein
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABD24466.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
scnpilot_cont_500_p_scaffold_62_33
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36480..37358
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC45_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ61144.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_62_34
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37418..38785
DNA (1368bp) protein (456aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomo
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZUH8_9SPHN rbh
scnpilot_cont_500_p_scaffold_62_35
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39075..40052
DNA (978bp) protein (326aa)
glpX; fructose 1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YKF5_9SPHN rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_62_36
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40214..41149
DNA (936bp) protein (312aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Sphingomonas sp. LH128 RepID=J8W025_9SPHN rbh
phosphoribosylpyrophosphate synthetase
scnpilot_cont_500_p_scaffold_62_37
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41185..42129)
DNA (945bp) protein (315aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZR22_9SPHN rbh
Scaffold14, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31123.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_62_38
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42272..43102
DNA (831bp) protein (277aa)
Histidinol-phosphatase {ECO:0000313|EMBL:GAO54583.1}; EC=3.1.3.15 {ECO:0000313|EMBL:GAO54583.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
histidinol-phosphate phosphatase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B36109 rbh
inositol monophosphatase
scnpilot_cont_500_p_scaffold_62_39
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43132..43503
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C8A6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP72553.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_62_40
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43697..43900
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B55064
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
rpmI; 50S ribosomal protein L35
scnpilot_cont_500_p_scaffold_62_41
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


43915..44277
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J3V1_9SPHN
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
rplT; 50S ribosomal protein L20
scnpilot_cont_500_p_scaffold_62_42
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44443..45351
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAI9_NOVAD
AraC family transcriptional regulator {ECO:0000313|EMBL:KHS47046.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_62_43
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


45452..46564
DNA (1113bp) protein (371aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IJP6_9SPHN rbh
scnpilot_cont_500_p_scaffold_62_44
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46576..48963
DNA (2388bp) protein (796aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingomonas sp. LH128 RepID=J8VYB9_9SPHN rbh
phenylalanyl-tRNA synthetase subunit beta
scnpilot_cont_500_p_scaffold_62_45
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49028..49924
DNA (897bp) protein (299aa)
Aldose 1-epimerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6B4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO54526.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
aldose epimerase
scnpilot_cont_500_p_scaffold_62_46
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49984..51528
DNA (1545bp) protein (515aa)
Peptide chain release factor 3 n=2 Tax=Novosphingobium RepID=F6IJP2_9SPHN rbh
prfC; peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1088721 species="Bacteria; Proteobacteria; Alphapr
scnpilot_cont_500_p_scaffold_62_47
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51812..52150
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAI3_NOVAD
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KHS47038.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
scnpilot_cont_500_p_scaffold_62_48
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52180..53592
DNA (1413bp) protein (471aa)
ammonia channel protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B36B5D rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
ammonia channel protein
scnpilot_cont_500_p_scaffold_62_49
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53794..54222)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3J5_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27578.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_62_50
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54539..55303
DNA (765bp) protein (255aa)
Cold-shock DNA-binding protein family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3J6_NOVAD rbh
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABD27577.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
cold-shock DNA-binding protein family protein
scnpilot_cont_500_p_scaffold_62_51
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55556..56746
DNA (1191bp) protein (397aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=983920 species="Bacteria; Prot
argD; acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDR7_9SPHN rbh
scnpilot_cont_500_p_scaffold_62_52
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56746..57672
DNA (927bp) protein (309aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GGX8_9SPHN rbh
ornithine carbamoyltransferase
scnpilot_cont_500_p_scaffold_62_53
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57681..58550
DNA (870bp) protein (290aa)
Hsp33 protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3J9_NOVAD rbh
Hsp33 protein
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
scnpilot_cont_500_p_scaffold_62_54
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58595..59293
DNA (699bp) protein (233aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine
7-cyano-7-deazaguanine synthase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J3T2_9SPHN rbh
ExsB protein
scnpilot_cont_500_p_scaffold_62_55
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59459..60568)
DNA (1110bp) protein (370aa)
Outer membrane protein A n=1 Tax=Sphingomonas sp. LH128 RepID=J8W1P7_9SPHN rbh
Outer membrane protein A {ECO:0000313|EMBL:EJU13611.2}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
OmpA/MotB
scnpilot_cont_500_p_scaffold_62_56
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61011..61583)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC76_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ61011.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_57
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61573..61968)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EC77_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK92383.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_58
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62236..62886
DNA (651bp) protein (217aa)
Membrane-like protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZDK7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54952.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_59
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63119..64318)
DNA (1200bp) protein (400aa)
glycine C-acetyltransferase (EC:2.3.1.29)
8-amino-7-oxononanoate synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4424B rbh
Scaffold14, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31144.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_62_60
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64321..64560)
DNA (240bp) protein (80aa)
phosphopantetheine-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5EA75
Phosphopantetheine-binding protein {ECO:0000313|EMBL:KHS48043.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
hypothetical protein
Displaying items 31-60 of 147 in total

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