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scnpilot_cont_500_p_scaffold_62

Search features with annotation key words

Displaying items 61-90 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_62_61
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64639..65016)
DNA (378bp) protein (126aa)
Two-component system, PleD family, response regulator DivK n=2 Tax=Novosphingobium RepID=F6IJL0_9SPHN
two-component system PleD family response regulator DivK
Two-component system, PleD family, response regulator DivK {ECO:0000313|EMBL:EHJ61018.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
scnpilot_cont_500_p_scaffold_62_62
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

65089..65379
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E70B
Uncharacterized protein {ECO:0000313|EMBL:KIY10417.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_62_63
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65376..66008
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDJ9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57260.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_62_64
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66001..66465
DNA (465bp) protein (155aa)
Endoribonuclease L-PSP n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3N3_NOVAD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABD27540.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
scnpilot_cont_500_p_scaffold_62_65
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66468..67214
DNA (747bp) protein (249aa)
glycerophosphoryl diester phosphodiesterase n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000367146E
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EGD57262.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
glycerophosphoryl diester phosphodiesterase
scnpilot_cont_500_p_scaffold_62_66
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67211..68350
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HSN9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB19336.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_67
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68352..68798)
DNA (447bp) protein (149aa)
Sel1 repeat-containing protein n=2 Tax=Novosphingobium RepID=F6IJK5_9SPHN
hypothetical protein
Sel1 repeat-containing protein {ECO:0000313|EMBL:EHJ61024.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
scnpilot_cont_500_p_scaffold_62_68
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69004..69462
DNA (459bp) protein (153aa)
molecular chaperone DnaK n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5CE59
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
TraR/DksA family transcriptional regulator
scnpilot_cont_500_p_scaffold_62_69
unknown

Not on your lists

69428..69532
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_62_70
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69565..69972
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Y0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH43495.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_cont_500_p_scaffold_62_71
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70057..71541
DNA (1485bp) protein (495aa)
ABC-type oligopeptide transport system, periplasmic component n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZP45_9SPHN rbh
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL21111.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_62_72
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71690..72385
DNA (696bp) protein (232aa)
DNA-binding response regulator CtrA n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PA50_9SPHN rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KEO86590.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
two component transcriptional regulator
scnpilot_cont_500_p_scaffold_62_73
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72456..72632)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B31496
Uncharacterized protein {ECO:0000313|EMBL:EKU72781.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
scnpilot_cont_500_p_scaffold_62_74
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72715..73434
DNA (720bp) protein (240aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; t
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBC3_9SPHN rbh
scnpilot_cont_500_p_scaffold_62_75
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73577..74347
DNA (771bp) protein (257aa)
Transcriptional regulator, DeoR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXN6_9BRAD
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCE11224.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bra
DeoR family transcriptional regulator
scnpilot_cont_500_p_scaffold_62_76
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74364..75503
DNA (1140bp) protein (380aa)
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JVI1_BURP8
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACC74958.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
scnpilot_cont_500_p_scaffold_62_77
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75667..76929
DNA (1263bp) protein (421aa)
putative sensor histidine kinase, putative diguanylate cyclase (GGDEF) domain n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0EA9 rbh
Diguanylate cyclase {ECO:0000313|EMBL:KHS47009.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
diguanylate cyclase
scnpilot_cont_500_p_scaffold_62_78
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76926..77432)
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TX10_TISMK
yncA; N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFK57298.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrell
scnpilot_cont_500_p_scaffold_62_79
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77493..79769)
DNA (2277bp) protein (759aa)
Malic enzyme {ECO:0000313|EMBL:KHS47674.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KHS47674.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosph
malic enzyme (EC:1.1.1.40)
Allosteric NADP-dependent malic enzyme n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G347_NOVAD rbh
scnpilot_cont_500_p_scaffold_62_80
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79964..82489
DNA (2526bp) protein (842aa)
DNA mismatch repair protein MutS n=1 Tax=Novosphingobium sp. AP12 RepID=J2GEW3_9SPHN rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonada
DNA mismatch repair protein MutS
scnpilot_cont_500_p_scaffold_62_81
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82540..82734
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:CCA91081.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_62_82
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82738..83148)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYE1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58061.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
scnpilot_cont_500_p_scaffold_62_83
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83232..84107)
DNA (876bp) protein (292aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Putative 3-hydroxybutyryl-coa dehydrogenase protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z6M8_9SPHN rbh
Putative 3-hydroxybutyryl-coa dehydrogenase protein {ECO:0000313|EMBL:EGD59688.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
scnpilot_cont_500_p_scaffold_62_84
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84122..84694)
DNA (573bp) protein (191aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Novosphingobium sp. AP12 RepID=J2FV10_9SPHN
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32654.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
scnpilot_cont_500_p_scaffold_62_85
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84714..84947)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A2Y5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54084.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_62_86
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84966..85823)
DNA (858bp) protein (286aa)
Glutamyl-tRNA synthetase, class Ic n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFL1_9SPHN rbh
glutamyl-tRNA synthetase
Glutamyl-tRNA synthetase, class Ic {ECO:0000313|EMBL:CCA91086.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
scnpilot_cont_500_p_scaffold_62_87
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85926..86534
DNA (609bp) protein (203aa)
HNH endonuclease n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L0D3_9SPHN rbh
HNH endonuclease {ECO:0000313|EMBL:EIZ77689.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
MFS transporter
scnpilot_cont_500_p_scaffold_62_88
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86554..87210)
DNA (657bp) protein (219aa)
TonB family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2P3F6_9SPHN
TonB-like protein {ECO:0000313|EMBL:KHS46840.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sub
TonB-like protein
scnpilot_cont_500_p_scaffold_62_89
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87373..88029
DNA (657bp) protein (219aa)
MOSC domain-containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VN39_9SPHN
MOSC domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
MOSC domain-containing protein
scnpilot_cont_500_p_scaffold_62_90
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88026..89540)
DNA (1515bp) protein (505aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase sigma-54 factor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBM8_NOVAD rbh
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
Displaying items 61-90 of 147 in total

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