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scnpilot_cont_500_p_scaffold_8_13

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(15744..16361)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPX8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 206.0
  • Bit_score: 233
  • Evalue 1.40e-58
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO56430.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 202.0
  • Bit_score: 292
  • Evalue 4.70e-76
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 206.0
  • Bit_score: 233
  • Evalue 4.00e-59

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCTGAAACGCCTGAAGGCAGCAGCCGCGATCGGTTTCTGATCGCGGCCGACGATCAATTTATCGAAAGCGGTTATGACCGCTGCACCATCCGCGCCATTGCCGCGCGGGCGGGCACCAGCCTTGCCTCGCTCAGCCGCAACTGGAGCGGCAAGCAGGAATTGTTCACCGAGGTTTTCCGGCGCCATTTTGACCCGATCCACGTCGCGCAAAACGCCGGCTTCGATGCGCTCGAAGCCTCGGGCGAGATCTCGGCCCGCGCCGTGATCGCCACCTTCTTCGGTTCGGCCATGCTGGGCGAGGGCGCCGATGTACAAAAAAGCCACCGGATCTACAGCCTCGCTCTGGTCGACCCGTCCGATGAGGCCCGTGTCATTACCCGCCAACTGGCCGAGCCGGTCCGGCGACGGGTGATCGGCCTGCTGCGCCAATGTCTGCCCGACCTCAACGAGGCGCGCTTCTTCCTGGCCATGAATGTGGTGCTGGGCGTTTATATCTATCCCCTCGCGCGCGGTGAGCGTCTGGCCGGGGTGATGGGTTTCGATCTGGCCTCGCTCGACTGGAATGAGGCGGTGGGGATGCTGGCCGATATGGTTTGCCGGGGGATCGAGGGGTAA
PROTEIN sequence
Length: 206
MAETPEGSSRDRFLIAADDQFIESGYDRCTIRAIAARAGTSLASLSRNWSGKQELFTEVFRRHFDPIHVAQNAGFDALEASGEISARAVIATFFGSAMLGEGADVQKSHRIYSLALVDPSDEARVITRQLAEPVRRRVIGLLRQCLPDLNEARFFLAMNVVLGVYIYPLARGERLAGVMGFDLASLDWNEAVGMLADMVCRGIEG*