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scnpilot_cont_500_p_scaffold_57_97

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(101816..103345)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E768_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 509.0
  • Bit_score: 574
  • Evalue 1.10e-160
  • rbh
chain-length determining protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 509.0
  • Bit_score: 574
  • Evalue 3.10e-161
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:EHJ62691.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 509.0
  • Bit_score: 574
  • Evalue 1.50e-160

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Taxonomy

Novosphingobium pentaromativorans → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGAATACGCTTCTGGAAGATTTCCGGGCCACGTTGCACAGTATCTGGCAACGCCGCTGGCTTGCGCTCGCTGTGGCGTGGGTGGTGTGCGTTCTGGGCTGGCTGGGTGTTTCGATGGTGCCCAACACCTATGAATCGCGCGCGCGCATCTTTGTCCAGCTCTACGATCCGCTGGCTGCGCAGGTCGGCATCAACGACACCGACCGCAAGGCCGCCATCGACAAGGTGCGCGATTCGCTGACCGGCACGCTCAATCTGGAGCGCGTGATCCGCTCGACCCGTCTGGGCGAGAACATCACCACGCGCAAGCAGATGGACGGCGCCGTGGCGGGCCTTGGCAAGGCGATCAAGATCAACGCCGATCAGGAAAACCTGTTCACCATCACGGCGCGTTCGTCTTCGATGCGCTATTCCGATGGCGAAAACGCCCGCCTGTCGCGCGATGTCGTCCAGAAGCTGATCGACATTTTCCGTGAGGAAAACCAGAACGGCGGGCAGGGCGAAATGAAGCAGACGCTTCAGTTCCTCGACCAGCAGCTGGCCAACCGTCAGGGCGAGCTTCAGGCTGCCGAACAGCGCCGTCTGGCCTTTGAATCGCAGCATCCCGAACTGGCGCAGGGCGGCGTTTCGCTGATCCAGCGTCTGGAACAGAGCCGCGCTTCGATCCGTGGCCTCGACGCCGACATTGCCGCCGCGCAAAGCTCGCTTGCCGCCATTCAGGCGCAGGTGGCCAGCACGCCCCAGACCGTGGCCGTTTCCGGCCCCACCGGCGGCCTGCGCGGTCAGCTGGCTCAGGTCCAGTCGGATCTGGCGATGATGCGCGCTCGCGGGCTGACGGAAAACCACCCCGACGTGATCACCGCGCGCAACCAGATCGTCTCGCTGCGCCAGCAGATCAAGGCGGAAGGCAATTCGGGCGTCGCCTCGGGCACGCCGAACCCGGCCTACAGCTCGCTCGAATCGATCCGCGCCGAACGTCAGGCCAACCTGCAATCGCTGCAGGCCCGCCGCACTGCCGCCGAAGGCGAGATCGCCCAGATCACCTCGCAGCAGTTCACCAATCCTGAACTGATGCAGGAAGCCCAGAACATCAGCCGCGACTATGACGTGCTGAAGAGTCAGTATGACAAGATGCTGACCGACCGCGAAAACCTGCGCCTCAAGGGCCAGGTCGTCTCGGCCCGCGGCACGGCCAAGGTTGATGTGCTCGATCCGCCGGTTCTGCCTCGCGCGCCCACCGCGCCCAATCGTCCGCTGTTGCTGCTGATCGTTCTGGCAGGTGGCATTGTGGCCGGGATTGGCGTGGCTTTCGCCACCGGTGAGCTTCAGTCGAGCTTCTCGACCACGAGCAAGCTGGAGCGTTCGACGGGTCTGCCGGTGCTGGGCGCCATTTCCCAGACGCTGACCGCCGAAGGGGCGGCCAGCAAGGCGCGCCGCACCCGCAACTTCTACGCTGCATCGGCGGCTCTGGGCGGTGTGTTTGCCCTGCTGCTGGCGATGGAATTCATCCAGCGCGGCACGATCGCCTGA
PROTEIN sequence
Length: 510
MNTLLEDFRATLHSIWQRRWLALAVAWVVCVLGWLGVSMVPNTYESRARIFVQLYDPLAAQVGINDTDRKAAIDKVRDSLTGTLNLERVIRSTRLGENITTRKQMDGAVAGLGKAIKINADQENLFTITARSSSMRYSDGENARLSRDVVQKLIDIFREENQNGGQGEMKQTLQFLDQQLANRQGELQAAEQRRLAFESQHPELAQGGVSLIQRLEQSRASIRGLDADIAAAQSSLAAIQAQVASTPQTVAVSGPTGGLRGQLAQVQSDLAMMRARGLTENHPDVITARNQIVSLRQQIKAEGNSGVASGTPNPAYSSLESIRAERQANLQSLQARRTAAEGEIAQITSQQFTNPELMQEAQNISRDYDVLKSQYDKMLTDRENLRLKGQVVSARGTAKVDVLDPPVLPRAPTAPNRPLLLLIVLAGGIVAGIGVAFATGELQSSFSTTSKLERSTGLPVLGAISQTLTAEGAASKARRTRNFYAASAALGGVFALLLAMEFIQRGTIA*