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scnpilot_cont_500_p_scaffold_1788_19

Organism: SCNPILOT_CONT_500_P_Novosphingobium_63_111

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12919..13146)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN66_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 75.0
  • Bit_score: 104
  • Evalue 3.60e-20
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EKF06377.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 75.0
  • Bit_score: 104
  • Evalue 5.00e-20
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 69.0
  • Bit_score: 99
  • Evalue 4.30e-19

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Taxonomy

Thalassospira profundimaris → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 228
ATGGAAATCCGGGAGACATTGGCGATCAATCTACGCAGGCTTAGGCATGCCGCTGGCTTGTCGCAGGAAGAGCTTGCGCACCGCGCTGACATTGACCGCACCTACATCAGTTCCATCGAGCGCCGGCAATATGCCGCCAGCATCGAGGTCGTCGATCGCTTGGCCAAGGGACTGGGCATCGAAGCATCGGAATTGCTGCAACCACCACCAACGCCAGACGGCGAATAG
PROTEIN sequence
Length: 76
MEIRETLAINLRRLRHAAGLSQEELAHRADIDRTYISSIERRQYAASIEVVDRLAKGLGIEASELLQPPPTPDGE*