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scnpilot_cont_500_p_scaffold_20

Search features with annotation key words

Displaying items 61-90 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_20_61
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78107..79234
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034800D8
GumN protein {ECO:0000313|EMBL:EIL89125.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.
polysaccharide biosynthesis protein GumN
scnpilot_cont_500_p_scaffold_20_62
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79248..79826
DNA (579bp) protein (193aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
ribosomal large subunit pseudouridine synthase E n=1 Tax=Xanthomonas vasicola RepID=UPI0001CBFFB1
ribosomal large subunit pseudouridine synthase e protein
scnpilot_cont_500_p_scaffold_20_63
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79823..80596
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3DF40
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGI79047.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagr
conserved hypothethical protein, SAM-dependent methyltransferase domain
scnpilot_cont_500_p_scaffold_20_64
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80600..81391)
DNA (792bp) protein (264aa)
Mg-dependent DNase (EC:3.1.21.-)
Mg-dependent DNase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7P4_9GAMM
Preprotein translocase subunit TatD {ECO:0000313|EMBL:GAN45603.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="M
scnpilot_cont_500_p_scaffold_20_65
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81437..84112
DNA (2676bp) protein (892aa)
ATP-dependent RNA helicase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VW24_9GAMM
ATP-dependent RNA helicase {ECO:0000313|EMBL:EIL91415.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
RNA helicase
scnpilot_cont_500_p_scaffold_20_66
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84117..84836)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8APT7_PLESH
Uncharacterized protein {ECO:0000313|EMBL:KGI78923.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
scnpilot_cont_500_p_scaffold_20_67
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84833..86338)
DNA (1506bp) protein (502aa)
Putative aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM89_9GAMM
Peptidase M28 {ECO:0000313|EMBL:GAN45600.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimin
putative aminopeptidase
scnpilot_cont_500_p_scaffold_20_68
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86406..87980)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037409AA rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45962.1}; Flags: Fragment;; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sou
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase
scnpilot_cont_500_p_scaffold_20_69
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88251..88832)
DNA (582bp) protein (194aa)
Bacterioferritin (Cytochrome b1) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDU8_9GAMM
bacterioferritin
Bacterioferritin {ECO:0000313|EMBL:AHX15696.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
scnpilot_cont_500_p_scaffold_20_70
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88923..90782)
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003649A2B rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN41851.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
hypothetical protein
scnpilot_cont_500_p_scaffold_20_71
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90815..92692)
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDG7_9GAMM
thiamine biosynthesis protein ThiC
scnpilot_cont_500_p_scaffold_20_72
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93039..93680)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374E972
Uncharacterized protein {ECO:0000313|EMBL:KFN45230.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_20_73

Not on your lists

94045..94710
DNA (666bp) protein (222aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EQD41331.1}; EC=2.1.1.77 {ECO:0000313|EMBL:EQD41331.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=2 Tax=mine drainage metagenome RepID=T0Z046_9ZZZZ
protein-L-isoaspartate O-methyltransferase
scnpilot_cont_500_p_scaffold_20_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94710..96197
DNA (1488bp) protein (496aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=mine drainage metagenome RepID=T1BM54_9ZZZZ
Type I secretion protein TolC {ECO:0000313|EMBL:GAN45914.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugak
type I secretion protein TolC
scnpilot_cont_500_p_scaffold_20_75
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96233..97567)
DNA (1335bp) protein (445aa)
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Dyella japonica RepID=UPI00031F49B3
3-deoxy-D-manno-octulosonic acid transferase
3-deoxy-D-manno-octulosonic acid transferase {ECO:0000313|EMBL:AIF45782.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="D
scnpilot_cont_500_p_scaffold_20_76
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97793..98821)
DNA (1029bp) protein (343aa)
Putative permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4W8R1_9GAMM
Putative permease {ECO:0000313|EMBL:EIL95852.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115
membrane protein
scnpilot_cont_500_p_scaffold_20_77
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98914..99621
DNA (708bp) protein (236aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U8F9_XANAP
scnpilot_cont_500_p_scaffold_20_78
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99668..100690
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VR09_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89650.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_20_79
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100829..103357
DNA (2529bp) protein (843aa)
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00393}; Short=GPAT {ECO:0000256|HAMAP-Rule:MF_00393};; EC=2.3.1.15 {ECO:0000256|HAMAP-Rule:MF_00393};; TaxID=1475481 species="Bacteria;
glycerol-3-phosphate acyltransferase n=1 Tax=Dyella japonica RepID=UPI0002ECB4CE
glycerol-3-phosphate acyltransferase
scnpilot_cont_500_p_scaffold_20_80
unknown

Not on your lists

comp(103371..103799)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_20_81
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103870..105273)
DNA (1404bp) protein (468aa)
Lipopolysaccharide synthesis sugar transferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS7_9GAMM rbh
Lipopolysaccharide synthesis sugar transferase {ECO:0000313|EMBL:EIM02169.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;"
sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
scnpilot_cont_500_p_scaffold_20_82
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105493..107325
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJJ9_9GAMM
scnpilot_cont_500_p_scaffold_20_83
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107380..109092)
DNA (1713bp) protein (571aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK8_9GAMM
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG87846.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
scnpilot_cont_500_p_scaffold_20_84
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109172..110227)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCW9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97310.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
serine kinase of the HPr protein, regulates carbohydrate metabolism
scnpilot_cont_500_p_scaffold_20_85
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110423..111934
DNA (1512bp) protein (504aa)
Mg-protoporphyrin IX monomethyl ester oxidative cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCW8_9GAMM rbh
Mg-protoporphyrin IX monomethyl ester oxidative cyclase {ECO:0000313|EMBL:EIL97309.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanob
Fe-S oxidoreductase
scnpilot_cont_500_p_scaffold_20_86
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111891..113189
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCW7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97308.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
hypothetical protein
scnpilot_cont_500_p_scaffold_20_87
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

113186..114148
DNA (963bp) protein (321aa)
Glycosyl transferase family 2 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF25_RHOM4
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACY47475.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
scnpilot_cont_500_p_scaffold_20_88
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114145..115116)
DNA (972bp) protein (324aa)
Radical SAM domain protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9R0_9FLAO
radical SAM protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
radical SAM protein
scnpilot_cont_500_p_scaffold_20_89
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(115362..117431)
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSN4_9GAMM
hypothetical protein Tax=RBG_13_Aminicenantes_62_12_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_20_90
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117493..120654)
DNA (3162bp) protein (1054aa)
Glycosyl transferase family 2 n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H3G6_GLUDA rbh
glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACI52729.1}; Putative glycosyl transferase {ECO:0000313|EMBL:CAP57314.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospir
Displaying items 61-90 of 303 in total

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