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scnpilot_cont_500_p_scaffold_20

Search features with annotation key words

Displaying items 91-120 of 303 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_20_91
Desulfitobacterium metallireducens, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(120651..122069)
DNA (1419bp) protein (473aa)
ABC transporter-like protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP1_9GAMM rbh
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF08077.1}; TaxID=871968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacteri
scnpilot_cont_500_p_scaffold_20_92
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122059..122886)
DNA (828bp) protein (276aa)
ABC-2 type transporter n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1H0_9GAMM rbh
wzm; putative transmembrane ABC transporter; K09690 lipopolysaccharide transport system permease protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
ABC-2 type transporter family protein
scnpilot_cont_500_p_scaffold_20_93
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122883..123836)
DNA (954bp) protein (318aa)
Type 11 methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAC4_9GAMM rbh
SAM-dependent methlyltransferase
SAM-dependent methlyltransferase {ECO:0000313|EMBL:AHX13432.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangn
scnpilot_cont_500_p_scaffold_20_94
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123833..124942)
DNA (1110bp) protein (370aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB50_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitr
scnpilot_cont_500_p_scaffold_20_95
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124939..126078)
DNA (1140bp) protein (380aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT51_9GAMM rbh
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG87839.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitr
scnpilot_cont_500_p_scaffold_20_96
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126081..127598)
DNA (1518bp) protein (506aa)
radical SAM protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00035FC4F3 rbh
Radical SAM protein {ECO:0000313|EMBL:KJV36810.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis
radical SAM protein
scnpilot_cont_500_p_scaffold_20_97
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127621..128319)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97298.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_cont_500_p_scaffold_20_98
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128319..129539)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCV6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97297.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
cytosine deaminase-like metal-dependent hydrolase
scnpilot_cont_500_p_scaffold_20_99
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129536..130369)
DNA (834bp) protein (278aa)
Methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT55_9GAMM rbh
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
methylase involved in ubiquinone/menaquinone biosynthesis
scnpilot_cont_500_p_scaffold_20_100
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130746..131564
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDJ0_9GAMM
hypothetical protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_20_101
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131623..132207
DNA (585bp) protein (195aa)
RNA polymerase sigma70 n=1 Tax=Dyella japonica RepID=UPI00031DD4C8
RNA polymerase sigma70
RNA polymerase sigma70 {ECO:0000313|EMBL:AIF46950.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_cont_500_p_scaffold_20_102
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132204..132836
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WT68_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87822.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sourc
scnpilot_cont_500_p_scaffold_20_103
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132833..134146
DNA (1314bp) protein (438aa)
Subtilase family serine protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WT69_9GAMM
subtilisin-like serine protease
Subtilisin-like serine protease {ECO:0000313|EMBL:AGG87821.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.
scnpilot_cont_500_p_scaffold_20_104
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134139..135191
DNA (1053bp) protein (351aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanth
GTP cyclohydrolase FolE2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WQD1_9GAMM
GTP cyclohydrolase
scnpilot_cont_500_p_scaffold_20_105
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135178..136422
DNA (1245bp) protein (415aa)
Cytochrome C family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP9_9GAMM
Cytochrome C family protein {ECO:0000313|EMBL:EIL98640.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobact
cytochrome C
scnpilot_cont_500_p_scaffold_20_106
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136456..139038
DNA (2583bp) protein (861aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ95_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89386.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter f
hypothetical protein
scnpilot_cont_500_p_scaffold_20_107
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

139049..139741
DNA (693bp) protein (231aa)
Cytochrome c4 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGP7_9GAMM
Cytochrome c4 {ECO:0000313|EMBL:EIL98638.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans
cytochrome C
scnpilot_cont_500_p_scaffold_20_108
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139851..140165)
DNA (315bp) protein (105aa)
Acetolactate synthase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C9_9GAMM
Acetolactate synthase small subunit {ECO:0000313|EMBL:EIL96070.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rho
acetolactate synthase
scnpilot_cont_500_p_scaffold_20_109
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140186..142153)
DNA (1968bp) protein (656aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
acetolactate synthase, large subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C8_9GAMM
scnpilot_cont_500_p_scaffold_20_110
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142221..142565)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_cont_500_p_scaffold_20_111
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142627..143637)
DNA (1011bp) protein (337aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase n=1 Tax=Dyella japonica RepID=UPI0002D73596 rbh
scnpilot_cont_500_p_scaffold_20_112
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143634..145331)
DNA (1698bp) protein (566aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX7_9GAMM rbh
scnpilot_cont_500_p_scaffold_20_113
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145344..146516)
DNA (1173bp) protein (391aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXX8_9GAMM rbh
3-isopropylmalate dehydrogenase
scnpilot_cont_500_p_scaffold_20_114
unknown

Not on your lists

comp(146513..146665)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_20_115
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146662..147246)
DNA (585bp) protein (195aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C5_9GAMM
isopropylmalate isomerase
scnpilot_cont_500_p_scaffold_20_116
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147243..148661)
DNA (1419bp) protein (473aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9C4_9GAMM
scnpilot_cont_500_p_scaffold_20_117
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148658..149899)
DNA (1242bp) protein (414aa)
2-isopropylmalate synthase (EC:2.3.3.13) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C4090
scnpilot_cont_500_p_scaffold_20_118
unknown

Not on your lists

150009..150218
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_20_119
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150300..151676)
DNA (1377bp) protein (459aa)
Threonine synthase {ECO:0000313|EMBL:EIL96060.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EIL96060.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rh
Threonine synthase n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9B9_9GAMM
threonine synthase
scnpilot_cont_500_p_scaffold_20_120
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151673..152623)
DNA (951bp) protein (317aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
homoserine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI000380590D
Displaying items 91-120 of 303 in total

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