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This organism can only be binned in the context of its binning project GWB1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

gwf2_scaffold_4539

Alias: GWF2_OD1_44_8_9

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_4539_1

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comp(1..216)
-----------------
DNA (216bp)
protein (72aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKT80862.1}; Flags: Fragment;; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
30S ribosomal protein S2
gwf2_scaffold_4539_2
Parcubacteria bacterium GW2011_GWD1_44_9, Parcubacteria, Bacteria

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comp(378..1037)
-----------------
DNA (660bp)
protein (220aa)
Peptide chain release factor 1 {ECO:0000313|EMBL:KKT86087.1}; TaxID=1618939 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_44_9.;"
peptide chain release factor 1
Peptide chain release factor 1
gwf2_scaffold_4539_3
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(1037..1330)
-----------------
DNA (294bp)
protein (98aa)
50S ribosomal protein L31 type B {ECO:0000313|EMBL:KKT14702.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
rpmE2; 50S ribosomal protein L31
50S ribosomal protein L31 type B
gwf2_scaffold_4539_4

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comp(1354..2769)
-----------------
DNA (1416bp)
protein (472aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT80865.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
YALI0F02387p
gwf2_scaffold_4539_5

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comp(2732..3403)
-----------------
DNA (672bp)
protein (224aa)
50S ribosomal protein L25 {ECO:0000313|EMBL:KKT80866.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
hypothetical protein
50S ribosomal protein L25
gwf2_scaffold_4539_6

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comp(3413..5062)
-----------------
DNA (1650bp)
protein (550aa)
Oxidoreductase {ECO:0000313|EMBL:KKT80867.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
Oxidoreductase
Oxidoreductase (Fragment)
gwf2_scaffold_4539_7
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(5059..5907)
-----------------
DNA (849bp)
protein (283aa)
Ketose-bisphosphate aldolase, class-II {ECO:0000313|EMBL:KKT14706.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
Tagatose-bisphosphate aldolase
Ketose-bisphosphate aldolase, class-II (Fragment)
gwf2_scaffold_4539_8
GWC1_OD1_43_30, Parcubacteria, Bacteria

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5939..6925
-----------------
DNA (987bp)
protein (329aa)
Sugar kinase, ribokinase family {ECO:0000313|EMBL:KKT14707.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
Sugar kinase, ribokinase family
Sugar kinase, ribokinase family (Fragment)
gwf2_scaffold_4539_9
GWC1_OD1_43_30, Parcubacteria, Bacteria

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6930..8264
-----------------
DNA (1335bp)
protein (445aa)
Na+/solute symporter {ECO:0000313|EMBL:KKT14708.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
Na+/solute symporter
Na+/solute symporter
gwf2_scaffold_4539_10

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comp(8437..8973)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT80871.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
hypothetical protein
gwf2_scaffold_4539_11

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comp(8975..9961)
-----------------
DNA (987bp)
protein (329aa)
Transketolase, central region {ECO:0000313|EMBL:KKT80872.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
Transketolase, central region
Transketolase, central region
gwf2_scaffold_4539_12
Parcubacteria bacterium GW2011_GWD1_44_9, Parcubacteria, Bacteria

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comp(9961..10827)
-----------------
DNA (867bp)
protein (289aa)
Transketolase domain protein {ECO:0000313|EMBL:KKT86077.1}; TaxID=1618939 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD1_44_9.;"
Transketolase protein
Transketolase domain protein
gwf2_scaffold_4539_13
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(10803..11360)
-----------------
DNA (558bp)
protein (186aa)
D-ribulose-5-phosphate 3 epimerase {ECO:0000313|EMBL:KKT14712.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
D-ribulose-5-phosphate 3 epimerase
D-ribulose-5-phosphate 3 epimerase
gwf2_scaffold_4539_14

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comp(11353..11829)
-----------------
DNA (477bp)
protein (159aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:KKT80875.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
ribose-5-phosphate isomerase B
Ribose-5-phosphate isomerase B
gwf2_scaffold_4539_15
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(11854..12843)
-----------------
DNA (990bp)
protein (330aa)
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:KKT14714.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
glyceraldehyde-3-phosphate dehydrogenase
Glyceraldehyde 3-phosphate dehydrogenase
gwf2_scaffold_4539_16
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(12860..13309)
-----------------
DNA (450bp)
protein (150aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT14715.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
hypothetical protein
Putative uncharacterized protein
gwf2_scaffold_4539_17
GWC1_OD1_43_30, Parcubacteria, Bacteria

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comp(13356..13637)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT14716.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
putative RNA-binding protein RbpA
Putative RNA-binding protein RbpA
gwf2_scaffold_4539_18

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comp(14521..15336)
-----------------
DNA (816bp)
protein (272aa)
Methyltransferase {ECO:0000313|EMBL:KKT80879.1}; TaxID=1618972 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_44_8b.;"
type 11 methyltransferase
Methyltransferase
Displaying 18 items

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