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13_1_40cm_scaffold_3913_1

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 2..1000

Top 3 Functional Annotations

Value Algorithm Source
pilB; type IV pilus biogenesis protein PilB; K02652 type IV pilus assembly protein PilB Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 335.0
  • Bit_score: 544
  • Evalue 1.10e-151
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=24445584 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 335.0
  • Bit_score: 446
  • Evalue 1.70e-122
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 335.0
  • Bit_score: 425
  • Evalue 2.00e-116

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAGGCGGCGCTGATCTCCCGCGTCAAGATCATGGCGCAGCTGAACATTGCCGAGCGGCGCGTGCCCCAGGACGGGCGCATCAAGCTGAAGATGGGCGCCCGGGTGATTGACTTTCGCGTCTCGACGTTACCGGTGTTGTTCGGCGAGAAGGTCGTGCTCCGGATCCTCGACAAGGGGAACCTGACGCTCGACCTGTCGAAGTTCGGCTTCGAGGCGAAGGCCGAGCAGGACCTGATGCGGAACATCATGAACCCGTACGGGATGGTGCTGGTCACCGGCCCGACGGGCTCGGGCAAGACGACCACGCTCTACTCGGCGCTCTCCAAGATCAACACCATCGAGGTCAACATCCTGACCGCCGAGGATCCTGTCGAGTACAACCTGATGGGGATCAACCAGGTCCTCGTCCGCAACGAGGTGGGGATGACGTTTGCGGCGGCGCTGAAGGCGTTCCTGCGCCAGGACCCCAACATCATCATGGTGGGCGAGATCCGCGACCTGGAGACCGGCTCGATCGCGATCAAGGCGGCGCTCACCGGGCACCTCGTGCTCTCCACGCTGCACACCAACGACGCGCCCTCGACCATCACCCGCATGGTGGACATGGGTGTCGAACCGTTCAACGTGGCGAGCGCGGTCAACCTGATCGTCGCCCAACGGCTGGTGCGTCGCATCTGCACGAGCTGCAAGCAGGAGCAACCCTACACCGTGGAGGAGCTGCACGCCCTCGGCGTGAAGGCGAGCGAGGGCCCCTTCTCCCGGGGGGCGGGGTGCGACACCTGCAATGGAACGGGTTATAAGGGCCGGCAGGGCCTGTACGAAGTCATGGCGCTGACCAGCCCGCTACGGCGGGCCATACTGAAGGGCGCCTCGACCGAGGAGCTGCGGGAGATGGCCGTGCAGGAGGGTATGTTGACCCTCCGCATGGACGGCATGGTGAAGGTGAAGAAGGGGATCACGACGCTCGAGGAAGTGGTGAAGGAGACCGCCGCCTAG
PROTEIN sequence
Length: 333
MKAALISRVKIMAQLNIAERRVPQDGRIKLKMGARVIDFRVSTLPVLFGEKVVLRILDKGNLTLDLSKFGFEAKAEQDLMRNIMNPYGMVLVTGPTGSGKTTTLYSALSKINTIEVNILTAEDPVEYNLMGINQVLVRNEVGMTFAAALKAFLRQDPNIIMVGEIRDLETGSIAIKAALTGHLVLSTLHTNDAPSTITRMVDMGVEPFNVASAVNLIVAQRLVRRICTSCKQEQPYTVEELHALGVKASEGPFSRGAGCDTCNGTGYKGRQGLYEVMALTSPLRRAILKGASTEELREMAVQEGMLTLRMDGMVKVKKGITTLEEVVKETAA*