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13_1_40cm_scaffold_3913_3

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: 2180..3385

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 402.0
  • Bit_score: 538
  • Evalue 5.20e-150
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 384.0
  • Bit_score: 626
  • Evalue 2.00e-176
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 404.0
  • Bit_score: 557
  • Evalue 2.30e-156

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCCCGTCTTCGAATACACCGCACGCAACCTCAAAGGCGATCTCGTCCAGGACAAGATCGACCTCCCCAACCGCGATGACGTCATCGCCCACCTGCGCAAGAACCGCATGGTGGTCGTGCAGGTCCGCCAAGCCCCGAAGGCGATCAGCCTCGGCGCCCTGTTCAAGGGCGGGATCAAGACGCGGGACGTCGTCATCTTCACGCGCCAGTTCGCCACCATGATCAACTCGGGTCTGCCGCTGGTGCAGGCCCTCGACATCCTCGCCCAGCAGACGGAGAACAAGGTCCTGGCCGACGTCACCCGGGCGGTGGTCTACGACGTCGAGAGCGGCCACACCCTGGCCGATGCGCTGCGCAAGCACCCCAAAGCGTTCACCGACCTGTTCGTCAACATGGTCGCCGCGGGCGAGGCCGGCGGCATTCTCGACACCATCCTGCTGCGGCTGGCGCAGTTCCTCGAGAAGAACGACCTCATCGTGCGCAAGGTGAAGGGCGCGATGATCTACCCCGCGGTCATCTTCTCGGTGGCCGCCATCGCGGTCGCGACACTCCTGATCTTCGTCATCCCGACGTTCCAGAAGATGTTCGCCTCGGTGAACCTCCTGCTGCCGTTGCCGACCCGCATCGTCATCGGCGCCAGTTACCTCCTGGCCCACTACTGGTGGGCGATTGGCGGCGTGATCGGGTTCACCGTCTTCGCGATCAACCGCTACTACAAGACCCCCCCTGGCAAGCTTCAGATCGACTCCCTGCTGCTGAAGCTGCCCGTGCTGGGCGACCTACTTCGCAAGTCGGCCGTGTCGCGCTTCACGCGCACGCTGGGCACGCTGATCTCCTCGGGTGTGTCGATCCTCGACGGCCTCGAGATCACTGCCCGCACCGCGGGCAACCAGGTGATCAGCAATGCGGTCATGGAGTCCCGCGCCTCGATCGCGGGCGGCGAGACCATCTCGGCCCCGCTGGCGAAGTCCAGAGTGTTCCCGCCAATGGTGATCTCGATGATCGCCGTGGGCGAGCAAACCGGCGGGCTCGACGAGATGCTTTCCAAGATCGCCGACTTCTACGACGACGAGGTGGACGCCGCAGTGAGCGCCCTACTCTCCATCATGGAGCCGATCATGATCGTGGTGCTCGGCGTCATCGTCGGGGGCATGGTGGTCGCCATGTACCTGCCCATCTTCGATATGGTGAACGCGGTGCAGTGA
PROTEIN sequence
Length: 402
MPVFEYTARNLKGDLVQDKIDLPNRDDVIAHLRKNRMVVVQVRQAPKAISLGALFKGGIKTRDVVIFTRQFATMINSGLPLVQALDILAQQTENKVLADVTRAVVYDVESGHTLADALRKHPKAFTDLFVNMVAAGEAGGILDTILLRLAQFLEKNDLIVRKVKGAMIYPAVIFSVAAIAVATLLIFVIPTFQKMFASVNLLLPLPTRIVIGASYLLAHYWWAIGGVIGFTVFAINRYYKTPPGKLQIDSLLLKLPVLGDLLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNQVISNAVMESRASIAGGETISAPLAKSRVFPPMVISMIAVGEQTGGLDEMLSKIADFYDDEVDAAVSALLSIMEPIMIVVLGVIVGGMVVAMYLPIFDMVNAVQ*