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scnpilot_cont_500_p_scaffold_10188

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_10188_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16..669)
DNA (654bp) protein (218aa)
Transposase IS111A/IS1328/IS1533 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC1_PSEUX
transposase IS111A/IS1328/IS1533
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:AEA26495.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
scnpilot_cont_500_p_scaffold_10188_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1009..1209
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26500.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_10188_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1235..1648
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXC5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26499.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_10188_4
unknown

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1666..1893
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_10188_5
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1890..2525)
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XHR0_RHOOP rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:EKT76635.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
TetR family transcriptional regulator
scnpilot_cont_500_p_scaffold_10188_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2676..3593
DNA (918bp) protein (306aa)
Alcohol dehydrogenase zinc-binding domain-containing protein n=1 Tax=Rhodococcus opacus M213 RepID=K8X772_RHOOP rbh
Alcohol dehydrogenase zinc-binding domain-containing protein {ECO:0000313|EMBL:EKT76636.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rho
alcohol dehydrogenase zinc-binding domain-containing protein
scnpilot_cont_500_p_scaffold_10188_7
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3449..4144)
DNA (696bp) protein (232aa)
Uncharacterized protein {ECO:0000313|EMBL:ETZ96317.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
scnpilot_cont_500_p_scaffold_10188_8
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4277..4588
DNA (312bp) protein (104aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
reverse transcriptase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A822
RNA-directed DNA polymerase {ECO:0000313|EMBL:EGX55280.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zinciresistens K42.
scnpilot_cont_500_p_scaffold_10188_9
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4615..6399)
DNA (1785bp) protein (595aa)
Transposase n=2 Tax=Mycobacterium avium complex (MAC) RepID=J9WGR0_9MYCO rbh
transposase
Integrase core domain protein {ECO:0000313|EMBL:ETZ27686.1}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" s
Displaying 9 items

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