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scnpilot_cont_500_p_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_276_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(581..1819)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035FB0CC rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH10785.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
scnpilot_cont_500_p_scaffold_276_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2143..2982
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI0003782E40 rbh
zinc/iron permease
Zinc/iron permease {ECO:0000313|EMBL:AEA22334.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_276_3
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2910..3905)
DNA (996bp) protein (332aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;"
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00035DBEC9 rbh
integral membrane sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_276_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3896..4258)
DNA (363bp) protein (121aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJV0_PSEUX
histidine kinase
scnpilot_cont_500_p_scaffold_276_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4318..5424)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000374C86E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26971.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_276_6
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5513..6190
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8B3_GEOOG
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB73535.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;"
scnpilot_cont_500_p_scaffold_276_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6187..6879)
DNA (693bp) protein (231aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL88_PSEUX
hypothetical protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA25017.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
scnpilot_cont_500_p_scaffold_276_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6900..7661
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJT9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26964.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_276_9
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7840..8928
DNA (1089bp) protein (363aa)
Extracellular solute-binding protein family 1 n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V4_FRASU rbh
extracellular solute-binding protein rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADP83174.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp.
scnpilot_cont_500_p_scaffold_276_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8933..10684
DNA (1752bp) protein (584aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V5_FRASU rbh
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP83175.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia
scnpilot_cont_500_p_scaffold_276_11
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10677..11828
DNA (1152bp) protein (384aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V6_FRASU rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ADP83176.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_276_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11850..12602
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V7_FRASU rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP83177.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_276_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12599..12811
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V8_FRASU
Uncharacterized protein {ECO:0000313|EMBL:EWM10145.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_276_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12837..13409
DNA (573bp) protein (191aa)
ChrB domain-containing protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6V3_FRASU
ChrB domain-containing protein
ChrB domain-containing protein {ECO:0000313|EMBL:ADP83173.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_276_15
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13438..14115)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000363D014
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryza
response regulator receiver
scnpilot_cont_500_p_scaffold_276_16
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14112..15719)
DNA (1608bp) protein (536aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" s
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036BFEEB rbh
signal transduction histidine kinase regulating citrate/malate metabolism
scnpilot_cont_500_p_scaffold_276_17
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15865..16674
DNA (810bp) protein (270aa)
ABC transporter ATP-binding protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JVR0_STREN rbh
Aliphatic sulfonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWS99959.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="In
ABC transporter ATP-binding protein
scnpilot_cont_500_p_scaffold_276_18
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16671..17570
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037EE72B rbh
ABC transporter permease {ECO:0000313|EMBL:EWS99960.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-244
nitrate/sulfonate/bicarbonate ABC transporter permease
scnpilot_cont_500_p_scaffold_276_19
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17606..18664
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000360968D rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWS99961.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intraspo
ABC transporter substrate-binding protein
scnpilot_cont_500_p_scaffold_276_20
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18709..19428)
DNA (720bp) protein (240aa)
Lipolytic protein G-D-S-L family n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5US67_TSUPD
G-D-S-L family lipolytic protein
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:ADG77134.1}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola
scnpilot_cont_500_p_scaffold_276_21
unknown

Not on your lists

comp(19442..19657)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_276_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19876..22107
DNA (2232bp) protein (744aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEA28749.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEA28749.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Peptidoglycan glycosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXU3_PSEUX rbh
scnpilot_cont_500_p_scaffold_276_23
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22190..22900
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J4S8_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB26575.1}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sm
scnpilot_cont_500_p_scaffold_276_24
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22888..23565
DNA (678bp) protein (226aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6Q0_FRASU
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADP81974.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_cont_500_p_scaffold_276_25
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23631..24317
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036B648E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT06044.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromat
ABC transporter
scnpilot_cont_500_p_scaffold_276_26
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24314..26989
DNA (2676bp) protein (892aa)
Putative uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P540_STRVO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:AEM84432.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger
hypothetical protein rbh
scnpilot_cont_500_p_scaffold_276_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26992..28284
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLX7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22325.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_276_28
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28281..29054
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037F6EAB
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AIJ23935.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239
scnpilot_cont_500_p_scaffold_276_29
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29260..30162
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNY243 RepID=UPI00037E8F46
Uncharacterized protein {ECO:0000313|EMBL:AKH82244.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_276_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30149..30979
DNA (831bp) protein (277aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJU7_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA26972.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
Displaying items 1-30 of 75 in total

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