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scnpilot_cont_500_p_scaffold_135_67

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 63360..67283

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 999.99
  • Bit_score: 2390
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWF0_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 999.99
  • Bit_score: 2392
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 999.99
  • Bit_score: 2390
  • Evalue 0.0

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3924
GTGCTCGACGTCAACTTCTTCGACGAACTGCGCATCGGCCTTGCCACCGCGGAGGACATCCGCCAGTGGTCGCACGGTGAGGTCAAGAAGCCCGAGACCATCAACTACCGCACGCTCAAGCCCGAGAAGGACGGACTCTTCTGCGAGAAGATCTTCGGCCCCACCCGGGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGCTTCAAGGGCATCATCTGCGAGCGCTGCGGTGTGGAGGTCACGCGCGCCAAGGTGCGTCGTGAGCGGATGGGTCACATCGAGCTGGCCGCACCGGTCACGCACATCTGGTACTTCAAGGGTGTGCCCAGCCGGCTGGGTTACCTGCTCGACCTGGCGCCCAAGGACCTCGAGAAGATCATCTACTTCGCGGCCTACGTGATCACGTCGGTCAACAAGGAGCTGCGGCACAACGACCTGTCCACGCTCGAGACCGAGATGAGCGTGGAGCGCAAGCGGGTCGAGAACCGCCGCGACGGTGACCTGGAGGCCCGGGCCCAGAAGCTCGAGGCCGACATCGCCGAGCTCGAGGCGGAGGGCGCCAAGAGCGACGTCCGGCGCAAGGTCAAGGAGGGTGGCGAGCGCGAGATGCGCCAGCTCCGTGACCGGGCCCAGCGCGAGCTGGACCGGCTCGACGAGATCTGGACCGCGTTCACCAAGCTCGACGTGCAGCAGCTCATCGCCGACGAGTCGATCTACCGGGAGCTCTACGACCGGTACGGCGACTACTTCACCGGCGCCATGGGCGCCGAGGCGATCCAGACGCTGCTGCAGAACTTCGACATCCCGGCCGAGGCCGAGAACCTGCGGGAGACCATCCGCAGCGGCAAGGGGCAGAAGAAGCTCCGTGCCCTCAAGCGCCTCAAGGTCGTCGCGGCGTTCCAGATGACGGGCAACAGCCCCATGGGCATGGTGCTCGACTGCGTCCCGGTCATCCCGCCGGACCTGCGCCCCATGGTGCAGCTCGACGGTGGCCGGTTCGCCACGTCCGACCTCAACGACCTGTACCGCCGCGTGATCAACCGCAACAACCGCCTCAAGCGACTGATCGACCTCGGCGCGCCCGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGCGGCCGGCCGGTGACGGGCCCGGGCAACCGGCCGCTCAAGTCGCTGTCCGACCTGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTCGACTACTCCGGCCGTTCGGTCATCGTCGTCGGCCCGCAGCTCAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTGGAGCTGTTCAAGCCGTTCGTCATGAAGCGGCTGGTCGACCTCAACCACGCGCAGAACATCAAGTCCGCGAAGCGCATGGTCGAGCGCGGCCGCTCGCAGGTGTGGGACGTGCTCGAAGAGGTCATCTCCGAGCACCCGGTGCTGCTCAACCGCGCACCGACCCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCGCAGCTGGTGGAGGGCAAGGCCATCCAGCTGCACCCGCTGGTCTGCGAGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCGGTGCACCTGCCGCTGTCGGCCGAGGCGCAGTCCGAGGCACGTGTGCTGATGCTGTCGTCGAACAACATCCTGTCGCCGGCGTCGGGTCGTCCGCTGGCCATGCCGCGTCTGGACATGGTCACGGGCATCTACCACCTGTCGAAGCTGCGCGAGGGCACGCCCGGCGAGGGTGGCGTCTACGGCACCGTGGCCGAGGCGATCATGGCCTACGACCGCAAGGCGCTCCACCTGCAGGCCCCCATCAAGATCCGCCTGCGCGGTGTGGTCCCCCCGGCCGACGTCGTGCCGGCGCTGGTCGAGAAGGGCTGGCAGCCCGGCGAGCAGTACCTGGCCGAGACCACTCTCGGGCGCGTGCTGTTCAACGAGCTGCTCCCGGTGGACTACCCGTTCGTCAACGAGATCCTGCCGAAGAAGCGTCAGGCCGCGATCATCAACGATCTGGCCGAGCGCTACTCGATGACCGAGGTCGCGCAGTGCCTCGACCGCCTCAAGGACGCCGGCTTCTACTGGGCCACCCGCTCCGGGGTCACGATCGCCATCTCCGATGTCGTCGTGCCGCCGAACAAGCAGGAGATCCTCGACGGCTACGAGGCCAAGGCGCTCCAGGTCGACAAGCGCTACCTGCGCGGGGCCCTGTCCCACCAGGAGCGCAACGACGAGATGGTCAAGATCTGGACCCAGGCGTCCGAAGAGGTCGCCCGGGCCATGGAGGAGAACTTCCCCGAGGACAACCCGATCCCCACGATCGTGGCGTCCGGCGCGGCGGGCAACATGACCCAGGTCCGGCAGCTCGCCGGTATGCGTGGTCTGGTGGCCAACCCGAAGGGTGAGTACATCCCCCGTCCGATCAAGGCCAACTTCCGTGAGGGCCTGTCGGTGCTGGAGTACTTCATCTCCACGCACGGCACGCGCAAGGGCCTCGCCGACACCGCGCTGCGCACCGCCGACTCGGGTTACCTGACCCGTCGTCTGGTGGACGTGTCGCAGGACGTCATCGTCCGCGAGGTCGACTGCGGCACCGAGCGCAGCGTCTCGATGGCGGTCACCGAGGAGGGCGCGGGCGGCAAGCGCATCGCGCACCGCTACATCCGCACGAGCATCTACGCACGGTGCTCCGCGGAGGAGGTCCGCGACGCGGCCGGCAACGTCATCGTCGAGAAGGGTGGCGACCTGGGCGACCCGGCGCTGGCCGCTCTCGTCGAGGCCGGCGTCAAGACCATCAAGGTCCGCAGCCCGCTGACCTGCATGTCCGCCAGCGGCATCTGCGGCATGTGCTACGGCCGCTCGATGGCCACCGGCAAGCTGGTGGACGTCGGCGAGGCCGTCGGCATCGTCGCGGCGCAGTCGATCGGTGAGCCGGGAACCCAGCTCACGATGCGCACCTTCCACACCGGTGGTGTGGCGGGCGACGACATCACCACCGGTCTGCCGCGTGTCCAGGAGCTGTTCGAGGCCCGGGTCCCGAAGGGCATGGCGCCCATCGCCGACGTCGACGGCCGCATCTCCATCGAGGACGGTGACCGCTTCTGGAAGATCACCCTCACCCCGGACGACGGGGGCGAGGAGATCGTCTACGAGAAGCTGTCCAAGCGGCAGTGGCTGGCCATGACGGTGGTCGACGGCCAGGAGCGTCCGCTGGCCGACGGCGACCACGTGCACGTCGGGCAGCTGCTGCTCGAGGGCACGGCCAACCCGCACGAGGTGCTGCGGGTCATGGGTCCGCGCGAGGTGCAGCTGCACCTCACGCGTGAGGTGCAGAAGGTGTACCGCACGCAGAGCGTGGACATCCACGACAAGCACATCGAGGTGATCATCCGGCAGATGCTGCGCCGGGTCACGATCATCGACTCGGGCGCCACGGAGTTCCTGCCCGGCTCGCTCGCCGAGCGCACCGACTTCGAGGCGCAGAACCGGCGTGTCGTGGCCGAGGGCGGCGAGCCCGCCTCCGGTCGTCCGGTGCTCATGGGGATCACGAAGGCCTCGCTGGCCACCGAGTCGTGGCTGTCCGCCGCCTCGTTCCAGGAGACCACCCGGATCCTCACCGATGCCGCGATCAACGGAAAGCGCGACAAGCTCGTCGGGCTCAAGGAGAACGTGATCATCGGAAAGCTGATCCCCGCCGGTACGGGGATCGGCCGGTACCGCAACATCCAGGTGCAGCCCACGGAGGAGGCCCGCGCGGCCGCCTACGCGCTGCCGAGCTACGACGACGGCTACTACAGCCCCGACGTGTTCGGTACGGGCACCGGTGCCGCGGTGCCGCTGGACGACTACGACTTCGGCCGCGACTACCGCTAG
PROTEIN sequence
Length: 1308
VLDVNFFDELRIGLATAEDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKIIYFAAYVITSVNKELRHNDLSTLETEMSVERKRVENRRDGDLEARAQKLEADIAELEAEGAKSDVRRKVKEGGEREMRQLRDRAQRELDRLDEIWTAFTKLDVQQLIADESIYRELYDRYGDYFTGAMGAEAIQTLLQNFDIPAEAENLRETIRSGKGQKKLRALKRLKVVAAFQMTGNSPMGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGRSQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQSEARVLMLSSNNILSPASGRPLAMPRLDMVTGIYHLSKLREGTPGEGGVYGTVAEAIMAYDRKALHLQAPIKIRLRGVVPPADVVPALVEKGWQPGEQYLAETTLGRVLFNELLPVDYPFVNEILPKKRQAAIINDLAERYSMTEVAQCLDRLKDAGFYWATRSGVTIAISDVVVPPNKQEILDGYEAKALQVDKRYLRGALSHQERNDEMVKIWTQASEEVARAMEENFPEDNPIPTIVASGAAGNMTQVRQLAGMRGLVANPKGEYIPRPIKANFREGLSVLEYFISTHGTRKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERSVSMAVTEEGAGGKRIAHRYIRTSIYARCSAEEVRDAAGNVIVEKGGDLGDPALAALVEAGVKTIKVRSPLTCMSASGICGMCYGRSMATGKLVDVGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGDDITTGLPRVQELFEARVPKGMAPIADVDGRISIEDGDRFWKITLTPDDGGEEIVYEKLSKRQWLAMTVVDGQERPLADGDHVHVGQLLLEGTANPHEVLRVMGPREVQLHLTREVQKVYRTQSVDIHDKHIEVIIRQMLRRVTIIDSGATEFLPGSLAERTDFEAQNRRVVAEGGEPASGRPVLMGITKASLATESWLSAASFQETTRILTDAAINGKRDKLVGLKENVIIGKLIPAGTGIGRYRNIQVQPTEEARAAAYALPSYDDGYYSPDVFGTGTGAAVPLDDYDFGRDYR*