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scnpilot_cont_500_p_scaffold_135_81

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 77927..78346

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L16 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWD7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 264
  • Evalue 8.60e-68
50S ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 264
  • Evalue 2.40e-68
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 264
  • Evalue 1.20e-67

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCTGATCCCCCGCAGGGTCAAGCACCGCAAGCAGCACCGTCCGCACCGCACCGGTGCGGCCTCGGGCGGCACGCGCGTCACGTTCGGCGACTACGGCATCCAGGCCCTCGAGCCCGCCTACGTCACGAACCGGCAGATCGAGTCGTCGCGTATCGCCATCAACCGGCACATCAAGCGTGGCGGCAAGGTCTGGATCAACATCTTCCCGGACCGCCCGCTCACCAAGAAGCCGGCGGAGACGCGCATGGGTTCCGGTAAGGGATCCGTCGAGTTCTGGGCGGCCAACGTCAAGCCCGGTCGGGTGCTGTTCGAGATGAGCTACCCCGACGAGAAGATCGCTCGTGAGGCCCTGCGCCGCGCGATGCACAAGCTGCCCATGAAGTGCCGGATCGTGACCCGTGAGGGTGGTGACATCTGA
PROTEIN sequence
Length: 140
MLIPRRVKHRKQHRPHRTGAASGGTRVTFGDYGIQALEPAYVTNRQIESSRIAINRHIKRGGKVWINIFPDRPLTKKPAETRMGSGKGSVEFWAANVKPGRVLFEMSYPDEKIAREALRRAMHKLPMKCRIVTREGGDI*