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scnpilot_cont_500_p_scaffold_135_89

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 80800..81339

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWC9_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 310
  • Evalue 1.30e-81
  • rbh
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 310
  • Evalue 3.80e-82
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 179.0
  • Bit_score: 310
  • Evalue 1.90e-81

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGTCCCGAATCGGGAAACTGCCCATCACCGTTCCGTCCGGCGTCGACGTGCAGATCGACGGCCGCACCGTGACCGTCAAGGGACCCAAGGGCACCCTGTCGCACACCGTGATCGAGCCGATCACGATCGAGCGCGACGACACCGGTGCCGTCGTGGTCAACCGCCCGGACGACGAGCGGAAGAGCAAGGCCTACCACGGTCTCTCGCGCACGCTGGTGAACAACCTGTTCGTCGGCGTCACGGCGGGCTACGAGAAGAAGCTCGAGATCTACGGCGTCGGTTACCGCGTCGTGCTCAAGGGCAGCTCGCTCGAGTTCGCGCTCGGCTACAGCCACCCGGTCGTCATCGAGGCGCCCGAGGGCATCACGTTCAAGGTCGAGTCCCCCACGCGGTTCTCCGTGTCGGGCATCGACAAGCAGAGGGTCGGCGAGATCTCGGCCAAGATCCGGAAGCTGCGCAAGCCCGACCCGTACAAGGGCAAGGGCGTCCGCTACGCCGGCGAGGTCATCCGCCGCAAGGTCGGGAAGACGGGTAAGTAA
PROTEIN sequence
Length: 180
MSRIGKLPITVPSGVDVQIDGRTVTVKGPKGTLSHTVIEPITIERDDTGAVVVNRPDDERKSKAYHGLSRTLVNNLFVGVTAGYEKKLEIYGVGYRVVLKGSSLEFALGYSHPVVIEAPEGITFKVESPTRFSVSGIDKQRVGEISAKIRKLRKPDPYKGKGVRYAGEVIRRKVGKTGK*