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scnpilot_cont_500_p_scaffold_255_12

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11147..11749)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Micromonospora sp. CNB394 RepID=UPI00037527B5 similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 189.0
  • Bit_score: 126
  • Evalue 4.00e-26
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC58742.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospor similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 203.0
  • Bit_score: 128
  • Evalue 1.10e-26
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 185.0
  • Bit_score: 121
  • Evalue 2.80e-25

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACACAGCGTCGGCAACGGTTCCCCGGCGTTGCCCGTCGACTGCTGCACGAAGCGATACTCGATGCCACCGAGACGCTCGGAGGCCAGGCCGGGTGGGACGCCCTGCGGATGGCCGATGTGGCGACAGCCGTGGGGATCAGCCGGCAGACGCTCTACACCGAGTTCGGCTCCAAACCAGCACTCGTCCGAGCCGTCGTCCTCGATCGAGCGAATCGGCTGACGGCGTCCCTGACCGGAGTGCTCGCCGCGGCCGACAGCGACGTGCACGGCGCTATTCGCGCCGCCGTGCGGTTCCTGCTGGACGCGGCGCGGGCCGACCCGCTGGTCAAGTGCCTGGTTTCCGGGCCTGACGGTGATCTACTCGCCCTCGTCACCACCGGCTCCGCGCCGATCATCGACGGCACCACCCGGGCGCTCACCGACTACGTGACCGAGGTGCGCCCGGGCACCGACGCGCGCCGCGTTGCGGTGGCCGCGGACGCGTTCACTCGGCTCGTGATCAGCCACGTCGTCCTCCCCGACCGCGAGATCGACGACGCCGCCGACGACGTGGCCGACGTCATCGGACCCTACCTGATGGAGGTGCTGTCGGCGACCTGA
PROTEIN sequence
Length: 201
MTQRRQRFPGVARRLLHEAILDATETLGGQAGWDALRMADVATAVGISRQTLYTEFGSKPALVRAVVLDRANRLTASLTGVLAAADSDVHGAIRAAVRFLLDAARADPLVKCLVSGPDGDLLALVTTGSAPIIDGTTRALTDYVTEVRPGTDARRVAVAADAFTRLVISHVVLPDREIDDAADDVADVIGPYLMEVLSAT*