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scnpilot_cont_500_p_scaffold_629_25

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 24993..25559

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I877_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 1.40e-33
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 4.00e-34
RNA polymerase sigma factor {ECO:0000313|EMBL:AEK39874.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (s similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 171.0
  • Bit_score: 150
  • Evalue 2.00e-33

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCACACGATCACCGAGACCACCGAGCACGACCTCACCGATCTGCTCGCCCGCGCGGGCCGCGGCGACCAGGTCGCCTGGTCCGCCCTGACCCGCCGCTACGCACCGCTGCTGTGGTCGCGGGTGCGCCGCTACCGCCTCCAGGAGGCCGACGGCGTGGACGTCGTGCAGACCACCTGGATGCGCCTGGCCGAGCACCTCGACCGCATCCACACCCCCGAGCACCTCGCCGGATGGCTCGCCACCGTCGTGAGCCACGAGTGCCAGCGGACGCTGCGGCTCACTGCGCGGGCCCTGCCGGTCGACGACGCCGCGGCCGCCGTCGTCGAGAGCTCCGCGGGCCCGGAGGAGCGGGCCGTCACGTCCGAGATGGTGGCCGCGCTGCGCACGGCCGTCGCCGGGCTGCCGACGCATCGCCGGGAGCTGATCGAGGCCCTGTTCGACGACGGGCGCCCGGCCTACGCCCAGGTCGCGCGCGACCTCGGCGTCCCGATCGGCAGCCTCGGGCCCACCCGGGCTCGCACGCTGGCCGAGCTGGCCCGGGTCCTGCGGCGGCAGGGCTTCTAG
PROTEIN sequence
Length: 189
MHTITETTEHDLTDLLARAGRGDQVAWSALTRRYAPLLWSRVRRYRLQEADGVDVVQTTWMRLAEHLDRIHTPEHLAGWLATVVSHECQRTLRLTARALPVDDAAAAVVESSAGPEERAVTSEMVAALRTAVAGLPTHRRELIEALFDDGRPAYAQVARDLGVPIGSLGPTRARTLAELARVLRRQGF*