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scnpilot_cont_500_p_scaffold_892_16

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(17759..18067)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW1_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 102.0
  • Bit_score: 178
  • Evalue 3.50e-42
50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 102.0
  • Bit_score: 178
  • Evalue 9.80e-43
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 102.0
  • Bit_score: 178
  • Evalue 4.90e-42

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGTACGCAGTCGTCAAGACCGGCGGTAAGCAGTACAAGGTGGCCGTCGACGACGTGCTCACCGTTGAGAAGATCAAGGGTGAGCCGGGCGCCAGCATCACGCTGCCCGCGCTGATGCTGGTCGACGGCGACAACGTCGTCACCGACGCCGCGGCGCTGGCCGGCGCGTCCGTCACCGCCACGGTCGTCGAGCACACCAAGGGCCCGAAGATCCGCATTCACAAGTTCAAGAACAAGACCGGGTACCACAAGCGTCAGGGGCACCGTCAGCCGCTGACGAAGGTCCAGGTCACCGGCATCGCGAAGTAA
PROTEIN sequence
Length: 103
MYAVVKTGGKQYKVAVDDVLTVEKIKGEPGASITLPALMLVDGDNVVTDAAALAGASVTATVVEHTKGPKIRIHKFKNKTGYHKRQGHRQPLTKVQVTGIAK*