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scnpilot_cont_500_p_scaffold_688_7

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 8084..9781

Top 3 Functional Annotations

Value Algorithm Source
GAF sensor signal transduction histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDFCF similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 574.0
  • Bit_score: 626
  • Evalue 2.00e-176
  • rbh
Histidine kinase {ECO:0000313|EMBL:KFZ81558.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 570.0
  • Bit_score: 590
  • Evalue 2.30e-165
dosT2; Hypoxia sensor histidine kinase response regulator DosT similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 570.0
  • Bit_score: 586
  • Evalue 6.60e-165
  • rbh

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Taxonomy

Amycolatopsis sp. MJM2582 → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGTCGGAGCGTGACCGCCCGCCGCCCGCCGGCGTGGTGCCGGACCTGCTGGCCGGGCTGCGGCTCGACGAGCTGCTCACCGAGGTCCAGGAGCGGATCGCCGAGATCGTGGCGACCCGTGACCGGATGCAGGGGCTGCTGCGCGCCGTCATCGCCGTCGGGGAGGGGCTGGAGCTCGACACCACCCTGCACCGGATCGTCGCGTCGGCCGTCGATCTCGTCGACGCGAGCTACGGTGCGCTGGGGGTTCTCGGGCCCGACGGCGGGATCACGCGGTTCCTGAATGTCGGGATCGACGAGGAGACCCGTTCCCGGATGGGTTCGCTGCCCGAGGGCAAGGGGCTGCTGGGCCAGCTGATCCTGGATCCCCGGCCGCTGCGGCTGGCGTCGCTCGCCGCGCACCCCTCGTCGGTGGGCTTCCCGCCGCACCACCCGCCGATGCGGACGTTCCTCGGGGTCCCCGTGCGGGTGCGGGACGCGGTGTTCGGGAACCTCTACCTCACCGAGAAGCGGGGCGGCGCGGAGTTCACGGCGGCCGACGAGGTGGTCGTCGAGGCACTGGCCGCCGCGGCCGGGATCGCGGTGCAGAACGCCGACCTGTTCGAGCAGACGCGCCTGCGGCAGCAGTGGCTCGAGGCGTCGGCGGAGATCCGCTCGGAGCTGCTCTCGGGCGCGAGCGACGCCGACGCCCTGCGGCTGATCGCGCAGCGCACCCTCGAGCTCACCGGCTCCGTCGCCACCCTGATCGTGCTGGGGCCGGGCCCCGACGACGGCGAGTTCGTCGTGCGGGCGGAGTGCGGCACGGAGCCGCTCGGGCTGCTCGGGCGGCCGCTGGACGCGGAGGACCCGCTGCTGCGGGAGGTCGTGGAGGGCCGCGCCGCGGTGCTCGCCACCGCTCCTCCCGCGACGCTGGCCCCGCACTACGGGCCCACGCTCGCGGTGCCGCTGCGCTCCCAGGACATCGTGACCGGCGTGCTCCTGGCGTTGCGTCGCACGGACGGGCCGCGGTTCCAGCACAGCGAGGTGCCGCTGCTGACGTCGTTCGCCGAGCAGACGACGCTGGCGCTGGAGCTGGGGGAGAAGAACCGGGCGCAACGCCAGCTCGACGTGTTCGCCGACCGCGACCGGATCGCCCGCGACCTGCACGACCACGTCATCCAGCGGTTGTTCGCCACCGGCCTGCAGCTGCAGAGCACGTTGCTGCGCACCGACGACCCGGTGGTGCAGGAGCGGATCGGGCACGCGGTGGAGGAGCTCGACACCACGGTGCGGGAGATCCGCACGGCCATCTTCGACCTGCACACCGTCGGTGGCGAGTCTGTCGCGCTGCGCCGACGGATACTCGACACCGCGGCCGATGCCGCCGCGGGGTCCGGGGTCTCCCCGTCCGTGCGGACCTCGGGGCCGGTGGACGCGCTGGTGCCCGACGAGGTCGGCGTGCACGCGGTCGCGGTGGTGCGGGAGGCGATCAGCAACGCACTGCGCCACGGGCAGGCCGCCGAGGTCACCGTCACCGTCGAGGCCGGCCCCGAGCTGCTGGTGGAGGTCGTCGACGACGGTATCGGGATCGACCCCGCGGCCGCGCGCAGCGGCCTGCACAACCTCGAGGACCGGGCGGCCGCGTGCGGCGGCACGCTCGTGGTGCAGCCGATGCCCGGGCGGGGCACCCGCCTGAGCTGGCGGGTGCCCCTGTCCTGA
PROTEIN sequence
Length: 566
MSERDRPPPAGVVPDLLAGLRLDELLTEVQERIAEIVATRDRMQGLLRAVIAVGEGLELDTTLHRIVASAVDLVDASYGALGVLGPDGGITRFLNVGIDEETRSRMGSLPEGKGLLGQLILDPRPLRLASLAAHPSSVGFPPHHPPMRTFLGVPVRVRDAVFGNLYLTEKRGGAEFTAADEVVVEALAAAAGIAVQNADLFEQTRLRQQWLEASAEIRSELLSGASDADALRLIAQRTLELTGSVATLIVLGPGPDDGEFVVRAECGTEPLGLLGRPLDAEDPLLREVVEGRAAVLATAPPATLAPHYGPTLAVPLRSQDIVTGVLLALRRTDGPRFQHSEVPLLTSFAEQTTLALELGEKNRAQRQLDVFADRDRIARDLHDHVIQRLFATGLQLQSTLLRTDDPVVQERIGHAVEELDTTVREIRTAIFDLHTVGGESVALRRRILDTAADAAAGSGVSPSVRTSGPVDALVPDEVGVHAVAVVREAISNALRHGQAAEVTVTVEAGPELLVEVVDDGIGIDPAAARSGLHNLEDRAAACGGTLVVQPMPGRGTRLSWRVPLS*