ggKbase home page

scnpilot_cont_500_p_scaffold_2133_8

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(5740..5943)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237ADFC similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 67.0
  • Bit_score: 128
  • Evalue 3.60e-27
Cold shock protein CspA {ECO:0000313|EMBL:CEL21871.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 1.30e-27
cold-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 65.0
  • Bit_score: 126
  • Evalue 2.20e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kibdelosporangium sp. MJ126-NF4 → Kibdelosporangium → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCACAGGGAACCGTGAAGTGGTTCAACGGGGAGAAGGGCTACGGCTTCATCTCCGTCGACGGGGGCGGCGCTGACGTCTTCGTCCACTACTCCGAGATCGACGGCAGCGGATTCCGCAGCCTCGACGAGGGGCAGCGAGTGGAGTTCGAGATCGGCCAGGGCCAGAAGGGCCCGCAGGCCCAGGGCGTGCGCGTCGTCTGA
PROTEIN sequence
Length: 68
MAQGTVKWFNGEKGYGFISVDGGGADVFVHYSEIDGSGFRSLDEGQRVEFEIGQGQKGPQAQGVRVV*