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scnpilot_cont_500_p_scaffold_3278_2

Organism: SCNPILOT_CONT_500_P_Pseudonocardia_73_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(782..1195)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, OmpR family, response regulator RegX3 n=1 Tax=Propionibacterium sp. oral taxon 192 str. F0372 RepID=S3YE34_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 97.0
  • Bit_score: 100
  • Evalue 1.20e-18
Two-component system, OmpR family, response regulator RegX3 {ECO:0000313|EMBL:EPH06755.1}; TaxID=1203605 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 97.0
  • Bit_score: 100
  • Evalue 1.70e-18
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 95.0
  • Bit_score: 92
  • Evalue 7.30e-17

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Taxonomy

Propionibacterium sp. oral taxon 192 → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGACGGTTCCACACGAAGACCCCCCCCGCAACTCTCCGGCGTTCCGATCGGTCACACCGGCCAGTCTCGGCCAGCTGCGGGTCCTACGGGTCGGCGATGTGGAACTTGAGCTCGACGCCCACCAGGTCCGGGTGGCTGGCAGTGTGTCCCGCCTTCCCCGCCGTGAGTTCCAGCTGCTGCACATGCTGATGGACAACGCCGGGCGCATCGTGGACCGCCGTGAGTTGCTGGACACGCTCTGGGGGGCAGGGCATGAGGACGCCCACGGAAGCATCGAAGTCCACATCAATCGGCTGCGCCGCCGGCTGCGCACGCCCGGACACCCCGAACGAATCCGTACCGTCCGGGGCCTGGGTTACATCTTCGATCTTCCCGCCGACACCGCACCGATCACCGATTCTCATCCCGGGTAG
PROTEIN sequence
Length: 138
MTVPHEDPPRNSPAFRSVTPASLGQLRVLRVGDVELELDAHQVRVAGSVSRLPRREFQLLHMLMDNAGRIVDRRELLDTLWGAGHEDAHGSIEVHINRLRRRLRTPGHPERIRTVRGLGYIFDLPADTAPITDSHPG*