ggKbase home page

scnpilot_p_inoc_scaffold_2086_7

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(6758..9775)

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UQF6_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 999.99
  • Bit_score: 1737
  • Evalue 0.0
  • rbh
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EPR34558.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulf similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 999.99
  • Bit_score: 1735
  • Evalue 0.0
HsdR family type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 999.99
  • Bit_score: 1656
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfovibrio alkalitolerans → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3018
GTGAGCGAAGACCTCAAGCCCTCCCGCTACGAACCGATTGCGCTTTCCAACGAAAGCACCGTCGTCGCGGAATTCGTGCGCCCGGACGAGGTACGCGAGGAACGCTACCAGTCCGAGGCGGAGCTTGAGCACGACCTCATCGAGCGCTTGCAGGTACAGGCCTACGAATACCTGCGCATCGGCAGCGAGGCCGACCTGATCGCCAACCTGCGCCGCCAGTTGGAGGCGCTGAACAAGATCACGCTCAGTGACAAGGAATGGCAGCAGTTCTTCGGCGAGAAGATCGCCGGGGCCAACGACGGCATCGTCGAGAAGACCGCCCGCATCCAGGAAGACCACGTTCAGGTCTTGAAGCGCGACGACGGCAGCACCAAGAACATCTACCTGATCGACAAGCAGAGCATCCACAACAACCGCCTGCAGGTCATCAACCAGTACGAGATCGAAGGCAAGCGCGCCAACCGCTATGACGTGACGGTGCTGGTCAACGGCCTGCCGATGGTGCACATCGAGCTGAAGCGGCGGGGCGTGGACATCCGCGAGGCGTTCAACCAGATCGACCGCTACAAGCGCGACAGCTTCTGGGCCGGTTCCGGCCTGTTCGAGTACGTGCAGTTGTTCGTCATCAGCAACGGCACGCTGACCAAGTACTACAGCAACACCGTGCGCGACGGCCACCTCGCCGAGCAGCGCAACAAGCGCGACCGCAAGAAAACCTCGAACAGCTTTTCCTTCACCAGTTGGTGGGCCGACGCGAAGAACCAGCCGATCACCGAACTGGCCGATTTCACCAAGACCTTCTTCGCCAAGCACGCGCTGCTGAACATCCTCACCCGGTATTGCGTGTTCGACGTGGATCGCAAGCTGCTGGTGATGCGCCCCTATCAGATCGTCGCGGCGGAACGCATCCTGCAACGCATCGCCACTGCCACCAACCATCGGCAACTGGGAACGGTGGCGGCGGGCGGCTACATCTGGCACACCACGGGCAGCGGCAAGACGCTGACCAGCTTCAAGGCCGCTCAACTGGCGCGTGGGCTGCCGGAAATCGACAAGGTGCTGTTCGTGGTGGACCGCAAGGATCTGGACTACCAGACCATGCGCGAGTACGAACGCTTCGAGAAAGGTGCGGCCAACTCCAACACCTCGACGGCGGTGCTGCAAAAGCAACTGGAGGATGCGAACGCACGCATCATCATCACTACCATCCAGAAGCTCAGCCGCTTCGTTGCCAAGAACAAGAAGCACCCGGTGTACGACGCGCACGTCGTGGTGATCTTCGACGAATGCCACCGCAGCCAGTTCGGCGACATGCACGCGGAGATCACCCGCGTCTTCAACCGCTACCACCTGTTCGGCTTCACCGGCACGCCGATCTTCGCCGACAACGCAGGCTCGGGCGGCAACCCGCGCTTGCGCACCACCGAGCAGGCCTTCGGCGACAAGCTGCACACCTACACCATCGTCGATGCGATCAACGACAAGAACGTGCTGCCGTTCCGCATCGACTACATCAACACCATCAAGACCGCGCCGAACGTGCGCGACAAGCAGGTGTCGGCCATCGACACGGAGCGGGCGCTGCTCGCGCCGGAACGCATCACGCAGATCGCGGGCTACATCCGCGAGCACTTCGACCAGAAGACCAAGCGCAGCGCCAGCTATCGGCACGGCGGCAAGCGGCTCAACGGCTTCAACTCGCTGTTCGCCACGGCCTCCATCGACGCGGCCAAACGCTACTACACGGAGTTCACCAGCCAGCAAAAGGACATCCCGCCCGCACAGCGGCTGAAGATCGGCCTGATCTACAGCTTCGCCGCCAACGAGGACGTCGATGGCCTGCTGGAAGAGGAGGAATTCGAGACCGAAGGGCTGGACCAAGGCTCGCGCGACTTCCTCGATGCGGCCATCAAGGACTACAACGGCCTGTTCGCCACCAACTTCGACACCTCCGCCGACAAGTTCCAGAACTACTACAAGGATTTGTCGCAGCGGCTGAAGAACCGCGAGCTTGACCTCGTGATCGTGGTCAACATGTTCCTGACCGGCTTCGACGCCACCACGCTGAACACGCTGTGGGTGGACAAGAACCTGCGCGCGCACGGGCTGATCCAGGCGTATTCGCGCACCAACCGTATCCTCAATTCGGTCAAGACCTACGGCAACATCGTTTCCTTCCGCGATCTGGAACAGGCCACCAACGACGCGTTGGCGCTGTTCGGAAACAAGGACGCCAAAGGCATCGTGCTGCTCAAGCCCTACGCGGACTACTACGCCGAGTACCAGAAGAAGGTCGCCGAACTGGTGGCGCTGTTTCCACTGGGCAAGGCCATCACCGGCGAGGCTGCGCAGAAGGCGTTCATCAAGCTGTTCGGCTCGATCCTGCGGCTGAAGAACATCCTCACGGCCTTCGATGATTTCGCGGGCAATGAAATCCTCAGCGATCGCGATTTTCAGGACTACCAGAGCCTGTACCTGAACCTGTACGCCGAGTTCCGCAGTGCCTCCGACGCCGAGAAGGAAACGATCAACGACGACGTGGTGTTCGAGATCGAGCTGATCAAGCAGGTCGAGATCAACGTCGATTACATCCTGATGCTGGTCGAGCGCTACATCAAGGCCAAGGGCACCGGCAAGGACAAGGAAATCCTCGCGACCATCGAGCGCGCGATCAATTCCAGCCCGTCGCTGCGCAACAAGAAAGACCTCATCGAGCAGTTCGTGGATTCCGTTTCGCCGAAGGCCCGGGTTGATGCGGAATGGCAGGCGTTCGTTGCCAGGAAAAAGGCCGAAGAACTTGACCAGATCATTGCCGATGAGGGCTTGAAGGCAGACGAGACGAAAGCGTTCGTGGACAACGCCTTCCGCGACGGCGCGATTCCGACCACAGGCACGGCCATCACGAAGATTCTGCCGCCAGTCTCGCGGTTCTCGAAGAACAACAACCATTCGGCGAAGAAGCAGACGGTGCTGGACAAGCTCGCGGCGTTCTTCGAGCGGTATTTCGGATTGGGGTGA
PROTEIN sequence
Length: 1006
VSEDLKPSRYEPIALSNESTVVAEFVRPDEVREERYQSEAELEHDLIERLQVQAYEYLRIGSEADLIANLRRQLEALNKITLSDKEWQQFFGEKIAGANDGIVEKTARIQEDHVQVLKRDDGSTKNIYLIDKQSIHNNRLQVINQYEIEGKRANRYDVTVLVNGLPMVHIELKRRGVDIREAFNQIDRYKRDSFWAGSGLFEYVQLFVISNGTLTKYYSNTVRDGHLAEQRNKRDRKKTSNSFSFTSWWADAKNQPITELADFTKTFFAKHALLNILTRYCVFDVDRKLLVMRPYQIVAAERILQRIATATNHRQLGTVAAGGYIWHTTGSGKTLTSFKAAQLARGLPEIDKVLFVVDRKDLDYQTMREYERFEKGAANSNTSTAVLQKQLEDANARIIITTIQKLSRFVAKNKKHPVYDAHVVVIFDECHRSQFGDMHAEITRVFNRYHLFGFTGTPIFADNAGSGGNPRLRTTEQAFGDKLHTYTIVDAINDKNVLPFRIDYINTIKTAPNVRDKQVSAIDTERALLAPERITQIAGYIREHFDQKTKRSASYRHGGKRLNGFNSLFATASIDAAKRYYTEFTSQQKDIPPAQRLKIGLIYSFAANEDVDGLLEEEEFETEGLDQGSRDFLDAAIKDYNGLFATNFDTSADKFQNYYKDLSQRLKNRELDLVIVVNMFLTGFDATTLNTLWVDKNLRAHGLIQAYSRTNRILNSVKTYGNIVSFRDLEQATNDALALFGNKDAKGIVLLKPYADYYAEYQKKVAELVALFPLGKAITGEAAQKAFIKLFGSILRLKNILTAFDDFAGNEILSDRDFQDYQSLYLNLYAEFRSASDAEKETINDDVVFEIELIKQVEINVDYILMLVERYIKAKGTGKDKEILATIERAINSSPSLRNKKDLIEQFVDSVSPKARVDAEWQAFVARKKAEELDQIIADEGLKADETKAFVDNAFRDGAIPTTGTAITKILPPVSRFSKNNNHSAKKQTVLDKLAAFFERYFGLG*